RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Slc26a2Q62273 739 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Dhx33Q80VY9 698 aaKnown RBP16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 BspryQ80YW5 473 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 TfQ921I1 697 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Tex12Q9CR81 123 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Map3k20Q9ESL4 802 aaKnown RBP16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 9330159F19RikD3Z623 648 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gm8050L7N2E3 205 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gsta1P13745 223 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Serpind1P49182 478 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Nek10Q3UGM2 1111 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 E2f5Q61502 335 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 TsnQ62348 228 aaKnown RBP16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gsta1Q6P8Q0 223 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 SvoplQ6PDF3 494 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Mrgprb8Q7TN51 330 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Prpf38bQ80SY5 542 aaKnown RBP16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Ddx50Q99MJ9 734 aaKnown RBP16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Dlgap1Q9D415 992 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Osbpl10S4R1M9 766 aa16.97■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Zfp217Q3U0X6 1041 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gm11437Q5QR91 290 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Zfyve28Q6ZPK7 905 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 GcshQ91WK5 170 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Cib1Q9Z0F4 191 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gm10424A0A0J9YVD0 481 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Vmn2r63E9Q0K5 859 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gm9268E9Q0M3 861 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gm7971J3QMM8 481 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Vmn2r62K7N712 859 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Vmn2r77L7N2B7 854 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Psma3O70435 255 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Scarf2P59222 833 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Pcsk1P63239 753 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Rps12P63323 132 aaKnown RBP16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Slc9b2Q5BKR2 547 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Kcnj11Q61743 390 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Zfp512bQ6PHP4 879 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Chsy1Q6ZQ11 800 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Slc35a5Q921R7 437 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Klhl28Q9CR40 571 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Aldh1a3Q9JHW9 512 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Mpp6Q9JLB0 553 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Olfr271-ps1A0A1L1SQH2 283 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Man1b1A2AJ15 658 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Tnfrsf11bO08712 401 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Nxpe4Q52KP5 543 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 PoliQ6R3M4 717 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Zbtb5Q7TQG0 670 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Ing4Q8C0D7 249 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gprc5bQ923Z0 410 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Ildr2B5TVM2 661 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 WapP01173 134 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Vbp1P61759 196 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Gng2P63213 71 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Ptcd3Q14C51 685 aaKnown RBP16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Shroom1Q5SX79 823 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 HadhQ61425 314 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 SvopQ8BFT9 548 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Ppwd1Q8CEC6 646 aaKnown RBP16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Thg1lQ9CY52 298 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Cnbd2Q9D5U8 673 aa16.96■□□□□ 0.31
Col17a1-201ENSMUST00000026045 Atf6F6VAN0 656 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 ClppO88696 272 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 PklrP53657 574 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 S100a1P56565 94 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Rnf113a2Q14B01 337 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Fam198aQ3UY90 562 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Marveld2Q3UZP0 555 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Slc9a4Q8BUE1 797 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Taf2Q8C176 1104 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Paqr5Q9DCU0 330 aa16.96■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Gm8444F6XS56 118 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Dppa5bP85965 119 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Znf112Q0VAW7 879 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Brip1Q5SXJ3 1174 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pcdh20Q8BIZ0 952 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Btnl9Q8BJE2 536 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Q9CXL3 195 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Nol3Q9D1X0 220 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 S100pbpQ9D5K4 396 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Arfgef2A2A5R2 1792 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pcna-ps2A0A140T8V5 261 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Magea10A2AMW4 325 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup10A2BIN1 180 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup14A2CEK7 180 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup19A9C497 187 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup15A9R9W0 180 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup17B5X0G2 180 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup8E9PVW0 235 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup7E9QA79 235 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Atxn2O70305 1285 aaKnown RBP16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup6P02762 180 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Myl4P09541 193 aaKnown RBP16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup1P11588 180 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mup2P11589 180 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 ZufspQ3T9Z9 577 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pik3c3Q6PF93 887 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Armc12Q80X86 340 aa16.95■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Q8BGA7 448 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms