RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TRIM4Q9C037 500 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 CHRAC1Q9NRG0 131 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 SETD4Q9NVD3 440 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 VANGL2Q9ULK5 521 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 SSX2IPQ9Y2D8 614 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 TBC1D30Q9Y2I9 924 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 DERAQ9Y315 318 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 CDY2AQ9Y6F7 541 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 CDY1Q9Y6F8 540 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 ZBTB24O43167 697 aaPredicted RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 GLDCP23378 1020 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 MSX2P35548 267 aaPredicted RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 ACADSBP45954 432 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 SOX4Q06945 474 aaPredicted RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 PAFAH1B3Q15102 231 aaKnown RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 DCAF4L1Q3SXM0 396 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 SLC27A1Q6PCB7 646 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 BNIPLQ7Z465 357 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 OSTM1Q86WC4 334 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 PSTKQ8IV42 348 aaKnown RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 DNAAF3Q8N9W5 541 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 TDRD5Q8NAT2 981 aaKnown RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 URGCPQ8TCY9 931 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 NPY6RQ99463 290 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 ADAMTS10Q9H324 1103 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 FAM96AQ9H5X1 160 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 LRRC40Q9H9A6 602 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 ZNF638Q14966 1978 aaKnown RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 CCDC78A2IDD5 438 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 ASB14A6NK59 587 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 EEF2KO00418 725 aaKnown RBP14.11□□□□□ -0.15
PHGDH-233ENST00000642021 AIM2O14862 343 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 ERCC2P18074 760 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 ACAT1P24752 427 aaKnown RBP14.11□□□□□ -0.15
PHGDH-233ENST00000642021 MPSTP25325 297 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 CD68P34810 354 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-233ENST00000642021 SERPINB8P50452 374 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 CATSPER4Q7RTX7 472 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 TMEM151AQ8N4L1 468 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 JADE3Q92613 823 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 OSMRQ99650 979 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 SNX25Q9H3E2 840 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 NMRAL1Q9HBL8 299 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 SMIM28A0A1B0GU29 152 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 A0A1B0GVG6 124 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 NEMP1O14524 444 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 TRIM13O60858 407 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 AP2A1O95782 977 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 FYNP06241 537 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 SBK3P0C264 359 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 EPHA3P29320 983 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 ISLR2Q6UXK2 745 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 PAQR9Q6ZVX9 377 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 CTU1Q7Z7A3 348 aaKnown RBP14.11□□□□□ -0.15
PHGDH-233ENST00000642021 ERO1BQ86YB8 467 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 NPWQ8N729 165 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 RTKNQ9BST9 563 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 MLPHQ9BV36 600 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-233ENST00000642021 TCF7L2Q9NQB0 619 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 UBP1Q9NZI7 540 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 PLXNA1Q9UIW2 1896 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 CAPN8A6NHC0 703 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 TK2O00142 265 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 NRP1O14786 923 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 XPO1O14980 1071 aaKnown RBP14.11□□□□□ -0.15
PHGDH-233ENST00000642021 ETS2P15036 469 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 MMEL1Q495T6 779 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 ARMC3Q5W041 872 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 TRIM74Q86UV6 250 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 TRIM73Q86UV7 250 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 SULF1Q8IWU6 871 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 MROH8Q9H579 483 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 SUDS3Q9H7L9 328 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-233ENST00000642021 BFARQ9NZS9 450 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 INPP5FQ9Y2H2 1132 aa14.11□□□□□ -0.15
PHGDH-233ENST00000642021 DNAH12Q6ZR08 3092 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 CXCL11O14625 94 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 SAT1P21673 171 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 PIK3R1P27986 724 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 NOS2P35228 1153 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 NUMBP49757 651 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 ZBTB17Q13105 803 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 GRAMD1BQ3KR37 738 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 LSM12Q3MHD2 195 aaKnown RBP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 FSCBQ5H9T9 825 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 TMEM198Q66K66 360 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 KCTD11Q693B1 232 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 ZNF410Q86VK4 478 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 GCNAQ96QF7 691 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 MCMBPQ9BTE3 642 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 CASS4Q9NQ75 786 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 IARS2Q9NSE4 1012 aaKnown RBP14.1□□□□□ -0.15
PHGDH-233ENST00000642021 OXSMQ9NWU1 459 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 ADAM28Q9UKQ2 775 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 PCDHGB4Q9UN71 923 aa14.1□□□□□ -0.15
PHGDH-233ENST00000642021 PCDHGB5Q9Y5G0 923 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms