RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 NAA15Q9BXJ9 866 aaKnown RBP10.37□□□□□ -0.75
PHGDH-222ENST00000641587 ACE2Q9BYF1 805 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-222ENST00000641587 RSPH9Q9H1X1 276 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-222ENST00000641587 NEUROG2Q9H2A3 272 aa10.37□□□□□ -0.75
PHGDH-222ENST00000641587 PRORYQ9H606 182 aa10.37□□□□□ -0.75
PHGDH-222ENST00000641587 OLA1Q9NTK5 396 aaKnown RBP10.37□□□□□ -0.75
PHGDH-222ENST00000641587 FBXL12Q9NXK8 326 aa10.37□□□□□ -0.75
PHGDH-222ENST00000641587 STOML2Q9UJZ1 356 aa10.37□□□□□ -0.75
PHGDH-222ENST00000641587 INTS6Q9UL03 887 aaKnown RBP10.37□□□□□ -0.75
PHGDH-222ENST00000641587 MYO6Q9UM54 1294 aa10.37□□□□□ -0.75
PHGDH-222ENST00000641587 HBS1LQ9Y450 684 aaKnown RBP10.37□□□□□ -0.75
PHGDH-222ENST00000641587 PCDHB4Q9Y5E5 795 aa10.37□□□□□ -0.75
PHGDH-222ENST00000641587 A0A1W2PR77 199 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 XPO1O14980 1071 aaKnown RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 RFPL3O75679 317 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 GABBR2O75899 941 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 CALCAP01258 141 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 ATP5BP06576 529 aaKnown RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 CCDC172P0C7W6 258 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 LCP1P13796 627 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 FERP16591 822 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 POLR2EP19388 210 aaKnown RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 ABCB4P21439 1286 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 CSKP41240 450 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 RGS7P49802 495 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 JAM2P57087 298 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 RPS24P62847 133 aaKnown RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 ZBTB16Q05516 673 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 C19orf57Q0VDD7 668 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 BNIP3Q12983 259 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 CST6Q15828 149 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 INAVAQ3KP66 663 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 C6orf118Q5T5N4 469 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 PIK3R6Q5UE93 754 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 NADSYN1Q6IA69 706 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 MMAAQ8IVH4 418 aaKnown RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 MFN1Q8IWA4 741 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 CCDC112Q8NEF3 446 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 SAP25Q8TEE9 199 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 CLEC4CQ8WTT0 213 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 COL26A1Q96A83 441 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 LMLNQ96KR4 655 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 MRGPRX3Q96LB0 322 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 DNAJC7Q99615 494 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 BAG1Q99933 345 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 UBXN6Q9BZV1 441 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 FBRSQ9HAH7 460 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 LRRC4Q9HBW1 653 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 AASDHPPTQ9NRN7 309 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 PCDHGA1Q9Y5H4 931 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 AK5Q9Y6K8 562 aa10.36□□□□□ -0.75
PHGDH-222ENST00000641587 ASH1LQ9NR48 2969 aaKnown RBP10.36□□□□□ -0.75
PHGDH-222ENST00000641587 FLNBO75369 2602 aaKnown RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 TTC34A8MYJ7 566 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 FOXN3O00409 490 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 ATXN7O15265 892 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 RNASEH2AO75792 299 aaKnown RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 IGLV3-27P01718 113 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 CD19P15391 556 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 CD38P28907 300 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 EPHA8P29322 1005 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 HNF1BP35680 557 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 PSMD8P48556 350 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 METAP1P53582 386 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 DAOAP59103 153 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 PPP2CBP62714 309 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 PPP2CAP67775 309 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 KLHL30Q0D2K2 578 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 BST2Q10589 180 aaKnown RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 HNRNPA1L2Q32P51 320 aaKnown RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 FSCBQ5H9T9 825 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 C9orf64Q5T6V5 341 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 E4F1Q66K89 784 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 FBXL19Q6PCT2 694 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 TMEM270Q6UE05 265 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 USP30Q70CQ3 517 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 LRRC8AQ8IWT6 810 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 AADATQ8N5Z0 425 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 SHC3Q92529 594 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 SYN2Q92777 582 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 GOLGA1Q92805 767 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 ZNF830Q96NB3 372 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-222ENST00000641587 DEF6Q9H4E7 631 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 CAAP1Q9H8G2 361 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 SUN2Q9UH99 717 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 NCKAP1Q9Y2A7 1128 aa10.35□□□□□ -0.75
PHGDH-222ENST00000641587 C10orf142B7Z368 130 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 E9PAM4 449 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 O00370 1275 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 DFNA5O60443 496 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 ACSL4O60488 711 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SDC3O75056 442 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 LATS1O95835 1130 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SERPING1P05155 500 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SKILP12757 684 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 PLA2G2AP14555 144 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 VAV1P15498 845 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SLC8A1P32418 973 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 STK19P49842 368 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms