RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 CASRP41180 1078 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 RPIAP49247 311 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 SLC8A3P57103 927 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 CLDN2P57739 230 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 RPS24P62847 133 aaKnown RBP8.1□□□□□ -1.11
PHGDH-217ENST00000641455 INCA1Q0VD86 236 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 CNTN1Q12860 1018 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 ACCSLQ4AC99 568 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 FAM26FQ5R3K3 315 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 PERM1Q5SV97 790 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 MPP7Q5T2T1 576 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 AGBL4Q5VU57 503 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 CLEC18BQ6UXF7 455 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 RAB11FIP2Q7L804 512 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 PDILTQ8N807 584 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 TMEM145Q8NBT3 493 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 CLEC18CQ8NCF0 446 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 ZNF548Q8NEK5 533 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-217ENST00000641455 ZNF507Q8TCN5 953 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 LMX1AQ8TE12 382 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 TAF4BQ92750 862 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 PTPRN2Q92932 1015 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 GLMNQ92990 594 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 LIN37Q96GY3 246 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-217ENST00000641455 LMLNQ96KR4 655 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 CLIC6Q96NY7 704 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 IPO9Q96P70 1041 aaKnown RBP8.1□□□□□ -1.11
PHGDH-217ENST00000641455 NOX5Q96PH1 765 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 SPAG5Q96R06 1193 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 IL12RB2Q99665 862 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 DDX50Q9BQ39 737 aaKnown RBP8.1□□□□□ -1.11
PHGDH-217ENST00000641455 IMPG2Q9BZV3 1241 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 STRADBQ9C0K7 418 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 ADNPQ9H2P0 1102 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 LRRC4Q9HBW1 653 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 PREBQ9HCU5 417 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 IPO11Q9UI26 975 aaKnown RBP8.1□□□□□ -1.11
PHGDH-217ENST00000641455 PCDHB11Q9Y5F2 797 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 PCDHGA7Q9Y5G6 932 aa8.1□□□□□ -1.11
PHGDH-217ENST00000641455 NBPF19A0A087WUL8 3843 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 EME2A4GXA9 379 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 A6NNZ2 444 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 CASC3O15234 703 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 AQP9O43315 295 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 KRT38O76015 456 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 PCDH8O95206 1070 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 LUC7L3O95232 432 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 ASS1P00966 412 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 HLA-DRAP01903 254 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 HNRNPA2B1P22626 353 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 GJB2P29033 226 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 PDX1P52945 283 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 SNRPFP62306 86 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 KCNAB2Q13303 367 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 EIF3IQ13347 325 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 MORC3Q14149 939 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 ZACNQ401N2 412 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 FAM133BQ5BKY9 247 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 FSCBQ5H9T9 825 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 BSPRYQ5W0U4 402 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 NUGGCQ68CJ6 796 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 BORAQ6PGQ7 559 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 GCNT7Q6ZNI0 430 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 Q6ZSR6 202 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 ATCAYQ86WG3 371 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 UNC45BQ8IWX7 931 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 APCDD1Q8J025 514 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 SLC22A18ASQ8N1D0 253 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 SIX6OS1Q8N1H7 587 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 CFAP52Q8N1V2 620 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 WDR48Q8TAF3 677 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 PARD3BQ8TEW8 1205 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 HTR3CQ8WXA8 447 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 NAT6Q93015 286 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 IFT43Q96FT9 208 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 PPP1R13BQ96KQ4 1090 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 PRICKLE1Q96MT3 831 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 CCDC3Q9BQI4 270 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 FUCA2Q9BTY2 467 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 FOXP3Q9BZS1 431 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 CYP3A43Q9HB55 503 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 TFIP11Q9UBB9 837 aaKnown RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 ANAPC2Q9UJX6 822 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 FBXO2Q9UK22 296 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-217ENST00000641455 SARDHQ9UL12 918 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 PLAAQ9Y263 795 aa8.09□□□□□ -1.11
PHGDH-217ENST00000641455 DOPEY1Q5JWR5 2465 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 A0A087X0B3 334 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 TMX2-CTNND1H3BSU7 103 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 RIOK3O14730 519 aaKnown RBP8.08□□□□□ -1.12
PHGDH-217ENST00000641455 AGFG2O95081 481 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 MOCS2O96007 188 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-217ENST00000641455 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
PHGDH-217ENST00000641455 JUNDP17535 347 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 WT1P19544 449 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-217ENST00000641455 POLE2P56282 527 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 TBX4P57082 545 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 DLG4P78352 724 aa8.08□□□□□ -1.12
PHGDH-217ENST00000641455 ADIGQ0VDE8 80 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms