RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 RETREG1Q9H6L5 497 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 RXFP1Q9HBX9 757 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 AP3B1O00203 1094 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 TEX28O15482 410 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 LILRB3O75022 631 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 HSPA1AP0DMV8 641 aaKnown RBP16.8■□□□□ 0.28
PHGDH-216ENST00000641375 HSPA1BP0DMV9 641 aaKnown RBP16.8■□□□□ 0.28
PHGDH-216ENST00000641375 CTSAP10619 480 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 BRAFP15056 766 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 NFKB1P19838 968 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 SLC11A2P49281 568 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 PAPOLAP51003 745 aaKnown RBP16.8■□□□□ 0.28
PHGDH-216ENST00000641375 TWF1Q12792 350 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 PLD1Q13393 1074 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 KBTBD12Q3ZCT8 623 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 SWT1Q5T5J6 900 aaKnown RBP16.8■□□□□ 0.28
PHGDH-216ENST00000641375 ARHGAP36Q6ZRI8 547 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 ITIH5Q86UX2 942 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 TRABD2AQ86V40 505 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 MDM1Q8TC05 714 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 CLP1Q92989 425 aaKnown RBP16.8■□□□□ 0.28
PHGDH-216ENST00000641375 PLD4Q96BZ4 506 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 STAMBPL1Q96FJ0 436 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 EPN3Q9H201 632 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 INTS9Q9NV88 658 aaKnown RBP16.8■□□□□ 0.28
PHGDH-216ENST00000641375 AAR2Q9Y312 384 aaKnown RBP16.8■□□□□ 0.28
PHGDH-216ENST00000641375 PCDHA11Q9Y5I1 949 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 INSL5Q9Y5Q6 135 aa16.8■□□□□ 0.28
PHGDH-216ENST00000641375 COCHO43405 550 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 PRKCHP24723 683 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 EFTUD2Q15029 972 aaKnown RBP eCLIP16.79■□□□□ 0.283e-6■■■■□ 23.9
PHGDH-216ENST00000641375 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 UNC5AQ6ZN44 842 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 CYS1Q717R9 158 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 TFAP2DQ7Z6R9 452 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 BADQ92934 168 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 FATE1Q969F0 183 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 PSMG2Q969U7 264 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 MRRFQ96E11 262 aaKnown RBP16.79■□□□□ 0.28
PHGDH-216ENST00000641375 GORASP1Q9BQQ3 440 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 LRRC40Q9H9A6 602 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 IPO11Q9UI26 975 aaKnown RBP16.79■□□□□ 0.28
PHGDH-216ENST00000641375 ANAPC1Q9H1A4 1944 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 TMEM120BA0PK00 339 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 F5H5T6 163 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 CACNG3O60359 315 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 ACSL4O60488 711 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 NEBLO76041 1014 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 INHBAP08476 426 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 MAPKAPK2P49137 400 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 KCNQ1P51787 676 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 ALFQ53S48 1182 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 CASC4Q6P4E1 433 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 PSRC1Q6PGN9 363 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-216ENST00000641375 DNAJB7Q7Z6W7 309 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-216ENST00000641375 PACS2Q86VP3 889 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 LRRC6Q86X45 466 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 MPP5Q8N3R9 675 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 CNTD1Q8N815 330 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 SLC44A1Q8WWI5 657 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 PPM1EQ8WY54 764 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 IGSF8Q969P0 613 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 AZIN2Q96A70 460 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 NOL6Q9H6R4 1146 aaKnown RBP16.79■□□□□ 0.28
PHGDH-216ENST00000641375 KCNK9Q9NPC2 374 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 TTLL3Q9Y4R7 772 aa16.79■□□□□ 0.28
PHGDH-216ENST00000641375 CNTN5O94779 1100 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 TACR2P21452 398 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 SESN2P58004 480 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-216ENST00000641375 C5orf22Q49AR2 442 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 NADSYN1Q6IA69 706 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 NAPEPLDQ6IQ20 393 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 LINC00523Q86TU6 105 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 BCAS4Q8TDM0 211 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 DCAKDQ8WVC6 231 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 SMC6Q96SB8 1091 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 IQANK1A0A1B0GTG1 560 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 ANXA9O76027 345 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 LINC00271P0C7V0 271 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 PGAM1P18669 254 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 CA8P35219 290 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 IFNAR2P48551 515 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 HNRNPDQ14103 355 aaKnown RBP16.78■□□□□ 0.28
PHGDH-216ENST00000641375 PARP15Q460N3 678 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 STEAP4Q687X5 459 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 CCDC91Q7Z6B0 441 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 SLC26A11Q86WA9 606 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 KLHDC8BQ8IXV7 354 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 FCRL5Q96RD9 977 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 MLPHQ9BV36 600 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-216ENST00000641375 TRABDQ9H4I3 376 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 PPANQ9NQ55 473 aaKnown RBP16.78■□□□□ 0.28
PHGDH-216ENST00000641375 BFARQ9NZS9 450 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 SAMD15Q9P1V8 674 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 ASB3Q9Y575 518 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
PHGDH-216ENST00000641375 RAMP2O60895 175 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 OAS1P00973 400 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms