RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SLC15A5A6NIM6 579 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 TRAFD1O14545 582 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 DNAJA2O60884 412 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 BCL10O95999 233 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 TMEM191BP0C7N4 346 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PROZP22891 400 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SERPINB1P30740 379 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 RAD23AP54725 363 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PTK6Q13882 451 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SF3B4Q15427 424 aaKnown RBP eCLIP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PTPN20Q4JDL3 420 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 IQSEC1Q6DN90 963 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 FAAH2Q6GMR7 532 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 ZBTB49Q6ZSB9 765 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 OR6J1Q8NGC5 347 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 RSPH1Q8WYR4 309 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 BORCS5Q969J3 196 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 FAF2Q96CS3 445 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SERAC1Q96JX3 654 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 DGCR6LQ9BY27 220 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 MIR1-1HGQ9H1L0 117 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 ABHD16BQ9H3Z7 469 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PNPOQ9NVS9 261 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 A0A087WZ62 844 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CCDC78A2IDD5 438 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 ELK3P41970 407 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CRHR2Q13324 411 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 PRPSAP1Q14558 356 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 TGFBIQ15582 683 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 RSBN1Q5VWQ0 802 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SNX32Q86XE0 403 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CMTM5Q96DZ9 223 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 FDXACB1Q9BRP7 624 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 MRPL4Q9BYD3 311 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 ING2Q9H160 280 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 FZD8Q9H461 694 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SPC25Q9HBM1 224 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 MYO1DO94832 1006 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CST3P01034 146 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SLC10A3P09131 477 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 ZNF865P0CJ78 1059 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CKMT2P17540 419 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 NR4A2P43354 598 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SEPHS1P49903 392 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 AMHR2Q16671 573 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 DARS2Q6PI48 645 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 ZPBP2Q6X784 338 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CCDC103Q8IW40 242 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 HSPH1Q92598 858 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 HDAC2Q92769 488 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CPB2Q96IY4 423 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 SNX27Q96L92 541 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 CCDC28BQ9BUN5 200 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 LRRC19Q9H756 370 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 GIN1Q9NXP7 522 aa12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 FAM32AQ9Y421 112 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-224ENST00000641259 HLA-DRAP01903 254 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 HOXD8P13378 290 aaPredicted RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 RFX1P22670 979 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ALDH4A1P30038 563 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 MYBPC1Q00872 1141 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 TRPC3Q13507 836 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 PLCL1Q15111 1095 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ERI1Q8IV48 349 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 FBXW8Q8N3Y1 598 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 FLCNQ8NFG4 579 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 DEPDC1BQ8WUY9 529 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 NCSTNQ92542 709 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ITM2CQ9NQX7 267 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 PPME1Q9Y570 386 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 MKI67P46013 3256 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 FAM149AA5PLN7 773 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 KBTBD13C9JR72 458 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 PRPF4O43172 522 aaKnown RBP eCLIP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 KRT8P05787 483 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 CYP2B6P20813 491 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 CASP2P42575 452 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 EFNA5P52803 228 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 LMNB2Q03252 620 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 WASHC5Q12768 1159 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 GRM1Q13255 1194 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 CCNIQ14094 377 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 LRP8Q14114 963 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 FGD3Q5JSP0 725 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 SLFN12LQ6IEE8 588 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ZCCHC9Q8N567 271 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms