RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 SRFBP1Q8NEF9 429 aaKnown RBP6.27□□□□□ -1.41
NECAP1-222ENST00000640072 CLP1Q92989 425 aaKnown RBP6.27□□□□□ -1.41
NECAP1-222ENST00000640072 SLC10A4Q96EP9 437 aa6.27□□□□□ -1.41
NECAP1-222ENST00000640072 RMND5BQ96G75 393 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-222ENST00000640072 RIPOR3Q96MK2 946 aa6.27□□□□□ -1.41
NECAP1-222ENST00000640072 CSRNP1Q96S65 589 aa6.27□□□□□ -1.41
NECAP1-222ENST00000640072 MRPS26Q9BYN8 205 aaKnown RBP6.27□□□□□ -1.41
NECAP1-222ENST00000640072 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.41
NECAP1-222ENST00000640072 DNAJC11Q9NVH1 559 aa6.27□□□□□ -1.41
NECAP1-222ENST00000640072 PSMC3IPQ9P2W1 217 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-222ENST00000640072 UBA2Q9UBT2 640 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-222ENST00000640072 TUBE1Q9UJT0 475 aa6.27□□□□□ -1.41
NECAP1-222ENST00000640072 RBM8AQ9Y5S9 174 aaKnown RBP6.27□□□□□ -1.41
NECAP1-222ENST00000640072 ARHGEF5Q12774 1597 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 ABCC10Q5T3U5 1492 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 A0A1B0GTQ1 180 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 ARHGAP42A6NI28 874 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 H3BM21 787 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TSPAN4O14817 238 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CIAO1O76071 339 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 MOCS3O95396 460 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GJB6O95452 261 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PSAPP07602 524 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 SLC5A2P31639 672 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PGM1P36871 562 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GPX6P59796 221 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 LASP1Q14847 261 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 RRS1Q15050 365 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TSC22D1Q15714 1073 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 THEM4Q5T1C6 240 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 HES5Q5TA89 166 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 USPL1Q5W0Q7 1092 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TXNDC11Q6PKC3 985 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 RRAGAQ7L523 313 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PIWIL3Q7Z3Z3 882 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 ALLCQ8N6M5 410 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 LINC00301Q8NCQ3 95 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GMCL1P1Q8NEA9 526 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CATSPER1Q8NEC5 780 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 DENND6BQ8NEG7 585 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 KBTBD7Q8WVZ9 684 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 MS4A14Q96JA4 679 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TUBB6Q9BUF5 446 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 ISCUQ9H1K1 167 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 ZNF275Q9NSD4 429 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 C20orf96Q9NUD7 363 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 SYBUQ9NX95 663 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 DDX43Q9NXZ2 648 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 DTLQ9NZJ0 730 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TLK1Q9UKI8 766 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 AKT3Q9Y243 479 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 ERGIC3Q9Y282 383 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 A0A1W2PRG0 241 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 USP17L3A6NCW0 530 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 USP17L4A6NCW7 530 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PGPEP1LA6NFU8 196 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 MIF4GDA9UHW6 222 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GPR171O14626 319 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PI15O43692 258 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GPR37L1O60883 481 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PSIP1O75475 530 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 SLC22A3O75751 556 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 RBBP9O75884 186 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 KRT37O76014 449 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 AGTP01019 485 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TNNI3P19429 210 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CCNE1P24864 410 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GARSP41250 739 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 HK2P52789 917 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 RPS26P62854 115 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 ARHGAP8P85298 464 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CHRNEQ04844 493 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 USP10Q14694 798 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TWISTNBQ3B726 338 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GNASQ5JWF2 1037 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CYP4A22Q5TCH4 519 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PTRHD1Q6GMV3 140 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 SULT1C3Q6IMI6 304 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 RPUSD3Q6P087 351 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 RFWD3Q6PCD5 774 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 APOA5Q6Q788 366 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 USP17L2Q6R6M4 530 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 RNF207Q6ZRF8 634 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 SPATC1Q76KD6 591 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 C16orf59Q7L2K0 433 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 USP17L1Q7RTZ2 530 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 GPR155Q7Z3F1 870 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 KBTBD2Q8IY47 623 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CLIP4Q8N3C7 705 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 PCYOX1LQ8NBM8 494 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CELF1Q92879 486 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 SGCZQ96LD1 299 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CCDC74BQ96LY2 380 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 FAM83CQ9BQN1 747 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CDK19Q9BWU1 502 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 CDADC1Q9BWV3 514 aa6.26□□□□□ -1.41
NECAP1-222ENST00000640072 IFIH1Q9BYX4 1025 aaKnown RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 TINAGL1Q9GZM7 467 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-222ENST00000640072 SAV1Q9H4B6 383 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms