RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 CNTN1Q12860 1018 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 STILQ15468 1287 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 TBC1D25Q3MII6 688 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 SETMARQ53H47 684 aaPredicted RBP15.47■□□□□ 0.07
SYNE2-228ENST00000639659 CCAR2Q8N163 923 aaKnown RBP15.47■□□□□ 0.07
SYNE2-228ENST00000639659 RNF34Q969K3 372 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 SLC35C1Q96A29 364 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 KLHDC7BQ96G42 594 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 SLC39A13Q96H72 371 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 FAM204AQ9H8W3 233 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 GDPD2Q9HCC8 539 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 SARDHQ9UL12 918 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 TPX2Q9ULW0 747 aaKnown RBP15.47■□□□□ 0.07
SYNE2-228ENST00000639659 FLNBO75369 2602 aaKnown RBP15.47■□□□□ 0.07
SYNE2-228ENST00000639659 C1QTNF3-AMACRE9PGA6 284 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 SLC31A1O15431 190 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 SART1O43290 800 aaKnown RBP15.46■□□□□ 0.07
SYNE2-228ENST00000639659 PLRG1O43660 514 aaKnown RBP15.46■□□□□ 0.07
SYNE2-228ENST00000639659 MPOP05164 745 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 MYF5P13349 255 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 ACP1P24666 158 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 CENPCQ03188 943 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 CFHR1Q03591 330 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 KCNH2Q12809 1159 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 NNTQ13423 1086 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 PROX2Q3B8N5 592 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 FAM46CQ5VWP2 391 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 Q6ZVU0 165 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 KANSL1Q7Z3B3 1105 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 ERICH1Q86X53 443 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 ATP6V0D2Q8N8Y2 350 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 ERCC4Q92889 916 aaPredicted RBP15.46■□□□□ 0.07
SYNE2-228ENST00000639659 BTN2A3PQ96KV6 586 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 CALN1Q9BXU9 219 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 CAAP1Q9H8G2 361 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 FZD3Q9NPG1 666 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 UCKL1Q9NWZ5 548 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 ARHGAP20Q9P2F6 1191 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 DMTF1Q9Y222 760 aa15.46■□□□□ 0.07
SYNE2-228ENST00000639659 TDRD6O60522 2096 aaKnown RBP15.46■□□□□ 0.07
SYNE2-228ENST00000639659 FAM237AA0A1B0GTK4 181 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 PRAMEF26H0Y7S4 382 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 RNGTTO60942 597 aaKnown RBP15.45■□□□□ 0.06
SYNE2-228ENST00000639659 TRUB2O95900 331 aaKnown RBP15.45■□□□□ 0.06
SYNE2-228ENST00000639659 THEGLP0DJG4 465 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 GGCXP38435 758 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 PCBP4P57723 403 aaKnown RBP15.45■□□□□ 0.06
SYNE2-228ENST00000639659 MCCD1P59942 119 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-228ENST00000639659 GABREP78334 506 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 PITX1P78337 314 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-228ENST00000639659 SULT2A1Q06520 285 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 RABGAP1LQ5R372 815 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 ARHGAP40Q5TG30 622 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF658Q5TYW1 1059 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-228ENST00000639659 AGBL4Q5VU57 503 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 BROXQ5VW32 411 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 DENND1BQ6P3S1 775 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 ARHGEF19Q8IW93 802 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 DCBLD1Q8N8Z6 715 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 RPRD1AQ96P16 312 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-228ENST00000639659 OSBPL2Q9H1P3 480 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 CPNE5Q9HCH3 593 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 WDR70Q9NW82 654 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 SLC12A6Q9UHW9 1150 aa15.45■□□□□ 0.06
SYNE2-228ENST00000639659 ARID1BQ8NFD5 2236 aaPredicted RBP15.44■□□□□ 0.06
SYNE2-228ENST00000639659 A0A1W2PQ27 194 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 A0A1W2PQ64 194 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 E5RJQ4 531 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 SLC7A4O43246 635 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 ACADSBP45954 432 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 E2F1Q01094 437 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 CETN1Q12798 172 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 SLC12A1Q13621 1099 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 ISM2Q6H9L7 571 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 IQCHQ86VS3 1027 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 TRIM69Q86WT6 500 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF248Q8NDW4 579 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 TRIM62Q9BVG3 475 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 KDM4CQ9H3R0 1056 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 POPDC2Q9HBU9 364 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 VPS28Q9UK41 221 aa15.44■□□□□ 0.06
SYNE2-228ENST00000639659 ASH1LQ9NR48 2969 aaKnown RBP15.44■□□□□ 0.06
SYNE2-228ENST00000639659 A0A1B0GVM2 712 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 A0A1W2PQU0 124 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 TCAF2A6NFQ2 919 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 KCNU1A8MYU2 1149 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 PYCARD-AS1I3L0S3 204 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 KPNA3O00505 521 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 USP12O75317 370 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 LETM1O95202 739 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 DGKAP23743 735 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 NUDT1P36639 197 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 OVGP1Q12889 678 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF211Q13398 564 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 DLG2Q15700 870 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF542PQ5EBM4 170 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 CXorf57Q6NSI4 855 aaKnown RBP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 SLC25A45Q8N413 288 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 LSM14AQ8ND56 463 aaKnown RBP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 OR4C6Q8NH72 309 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms