RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 MMP14P50281 582 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GATMP50440 423 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 NR0B1P51843 470 aaKnown RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LILRA4P59901 499 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LMO4P61968 165 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 CDK17Q00537 523 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 NSUN2Q08J23 767 aaKnown RBP eCLIP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GAGE2BQ13066 116 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 RAB32Q13637 225 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GAGE2EQ4V326 116 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 DCAF6Q58WW2 860 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 RNF220Q5VTB9 566 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LMBRD2Q68DH5 695 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GAGE2AQ6NT46 116 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SLC39A5Q6ZMH5 540 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TCF24Q7RTU0 167 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SLC15A3Q8IY34 581 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 NKAPQ8N5F7 415 aaKnown RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 OR6B3Q8NGW1 331 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SVIPQ8NHG7 77 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LMO3Q8TAP4 145 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 NEK9Q8TD19 979 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ABHD5Q8WTS1 349 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LEO1Q8WVC0 666 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 C5orf34Q96MH7 638 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LRRC3BQ96PB8 259 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TWNKQ96RR1 684 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SH3GL2Q99962 352 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 B3GNT4Q9C0J1 378 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 MMP25Q9NPA2 562 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ANKRD10Q9NXR5 420 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GAGE2DQ9UEU5 116 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ASAP1Q9ULH1 1129 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TBC1D30Q9Y2I9 924 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 COL4A3BPQ9Y5P4 624 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 C17orf102A2RUQ5 167 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SLC38A8A6NNN8 435 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 RNF103O00237 685 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ALDH1L1O75891 902 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 MAP4K4O95819 1239 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 NKX2-1P43699 371 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 JAK3P52333 1124 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GNB1P62873 340 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 RPL24P83731 157 aaKnown RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GHRHRQ02643 423 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF672Q499Z4 452 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SLC9C1Q4G0N8 1177 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 PCID2Q5JVF3 399 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TSTD2Q5T7W7 516 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 IZUMO3Q5VZ72 239 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 NAA35Q5VZE5 725 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 CCSAPQ6IQ19 270 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TMEM71Q6P5X7 295 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SPSB3Q6PJ21 355 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 EP400NLQ6ZTU2 488 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TMC8Q8IU68 726 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ENDOVQ8N8Q3 282 aaKnown RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 FANCBQ8NB91 859 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 FAM46DQ8NEK8 389 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 FAM71BQ8TC56 605 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LRTOMTQ8WZ04 291 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SLC35A4Q96G79 324 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 CCDC17Q96LX7 622 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 F2RL3Q96RI0 385 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TTLL2Q9BWV7 592 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 B3GNT5Q9BYG0 378 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 MAGEH1Q9H213 219 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 RMI1Q9H9A7 625 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 POT1Q9NUX5 634 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ABI3Q9P2A4 366 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 EDARQ9UNE0 448 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 DHX57Q6P158 1386 aaKnown RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ZFHX2Q9C0A1 2572 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ATRXP46100 2492 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 B4DGG1 531 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 F5H697 171 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 F8W810 466 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TCERG1O14776 1098 aaKnown RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 KLK8O60259 260 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 DTNBO60941 627 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 CNTN5O94779 1100 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 DDAH2O95865 285 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 KRT6AP02538 564 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 KRT6BP04259 564 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF26P17031 533 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GALNSP34059 522 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 KRT6CP48668 564 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 CACNB3P54284 484 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SCAND1P57086 179 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 E2F1Q01094 437 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 SRSF9Q13242 221 aaKnown RBP eCLIP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 TTF1Q15361 905 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 DLGAP5Q15398 846 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 OASLQ15646 514 aaKnown RBP0.22□□□□□ -2.37
CCDC7-215ENST00000639629 ASIC2Q16515 512 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 LY6KQ17RY6 165 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 GJB7Q6PEY0 223 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 CCHCR1Q8TD31 782 aa0.22□□□□□ -2.37
CCDC7-215ENST00000639629 PGBD4Q96DM1 585 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms