RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	GOLGA8N	F8WBI6	632 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	SOCS2	O14508	198 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	HDAC3	O15379	428 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	PAPSS1	O43252	624 aa	Predicted RBP	11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	ENDOD1	O94919	500 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	CPNE6	O95741	557 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	ZNF846	Q147U1	533 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	INTS11	Q5TA45	600 aa	Known RBP	11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	CADM3	Q8N126	398 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	CCDC24	Q8N4L8	307 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	CDKL2	Q92772	493 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	TMA16	Q96EY4	203 aa	Known RBP	11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	ADI1	Q9BV57	179 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	NDEL1	Q9GZM8	345 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	PRR12	Q9ULL5	1215 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	PCDHGC3	Q9UN70	934 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	NUB1	Q9Y5A7	615 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	SI	P14410	1827 aa		11.31	□□□□□ -0.6
STRADA-231	ENST00000638708	PTPRJ	Q12913	1337 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TRUB2	O95900	331 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	KRT3	P12035	628 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ZNF182	P17025	639 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TCN1	P20061	433 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ADORA2A	P29274	412 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	PSME3	P61289	254 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ATP6V0D1	P61421	351 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NME3	Q13232	169 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	SEL1L3	Q68CR1	1132 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	GPAT2	Q6NUI2	795 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NAPRT	Q6XQN6	538 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	C4orf19	Q8IY42	314 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	KIAA0319L	Q8IZA0	1049 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	FAM156A	Q8NDB6	213 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	PNPT1	Q8TCS8	783 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	BSND	Q8WZ55	320 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	HPS1	Q92902	700 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ZNF347	Q96SE7	839 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NANOG	Q9H9S0	305 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ADA2	Q9NZK5	511 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NXF1	Q9UBU9	619 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	WDR81	Q562E7	1941 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	BCLAF3	A2AJT9	711 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	HEATR9	A2RTY3	570 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TESPA1	A2RU30	521 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TMEM150B	A6NC51	233 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TCAF2	A6NFQ2	919 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NEMP1	O14524	444 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TRIM24	O15164	1050 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	AMH	P03971	560 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	GNAO1	P09471	354 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	C7	P10643	843 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	MIP	P30301	263 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	POLR2B	P30876	1174 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TCF7	P36402	384 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	GARS	P41250	739 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	MAGEA12	P43365	314 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	CCT8	P50990	548 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	WNT7B	P56706	349 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	PRKCQ	Q04759	706 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	MMRN1	Q13201	1228 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TMEM179	Q6ZVK1	233 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	KCTD8	Q6ZWB6	473 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ERMP1	Q7Z2K6	904 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	MCF2L2	Q86YR7	1114 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	WDTC1	Q8N5D0	677 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TMCO5A	Q8N6Q1	288 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	SLC4A11	Q8NBS3	891 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	OR13F1	Q8NGS4	319 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ISL2	Q96A47	359 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	PGBD4	Q96DM1	585 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	FEM1C	Q96JP0	617 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	SH2D3A	Q9BRG2	576 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NTPCR	Q9BSD7	190 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	KLHL25	Q9H0H3	589 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	UNC93B1	Q9H1C4	597 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	VPS33B	Q9H267	617 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ADAMTS10	Q9H324	1103 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	SMARCAD1	Q9H4L7	1026 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	EHD1	Q9H4M9	534 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	NOL11	Q9H8H0	719 aa	Known RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	CD320	Q9NPF0	282 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	ANKEF1	Q9NU02	776 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	GGA1	Q9UJY5	639 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	RAP2C	Q9Y3L5	183 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	TCAF1	Q9Y4C2	921 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	PCDHGA7	Q9Y5G6	932 aa		11.3	□□□□□ -0.6
STRADA-231	ENST00000638708	C1orf232	A0A0U1RR37	186 aa		11.29	□□□□□ -0.6
STRADA-231	ENST00000638708	ZNF839	A8K0R7	811 aa		11.29	□□□□□ -0.6
STRADA-231	ENST00000638708	DLGAP1	O14490	977 aa		11.29	□□□□□ -0.6
STRADA-231	ENST00000638708	DHX15	O43143	795 aa	Known RBP	11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms