RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 IL27RAQ6UWB1 636 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 KBTBD2Q8IY47 623 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 BAP1Q92560 729 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 LRRC19Q9H756 370 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 FANCEQ9HB96 536 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 PRR23AA6NEV1 266 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 AKAP5P24588 427 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 RPS12P25398 132 aaKnown RBP18.8■□□□□ 0.6
SCARB2-213ENST00000638680 RBM44Q6ZP01 1051 aaKnown RBP18.8■□□□□ 0.6
SCARB2-213ENST00000638680 LRRC55Q6ZSA7 311 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 ASB2Q96Q27 587 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 C15orf38-AP3S2A0A0A6YYH1 394 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 MYL12BO14950 172 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 RAMP2O60895 175 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 BST1Q10588 318 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 RGS21Q2M5E4 152 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ARPINQ7Z6K5 226 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ALYREFQ86V81 257 aaKnown RBP18.79■□□□□ 0.6
SCARB2-213ENST00000638680 HOMEZQ8IX15 550 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF398Q8TD17 642 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ZFYVE28Q9HCC9 887 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 KLHL1Q9NR64 748 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 EFCAB10A6NFE3 127 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 SNPHO15079 494 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 PSMB4P28070 264 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ANKRD13AQ8IZ07 590 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 SLC2A14Q8TDB8 520 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 PLEKHG4BQ96PX9 1271 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF112Q9UJU3 913 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ZMYM2Q9UBW7 1377 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 CYP2A7P20853 494 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF157P51786 506 aaPredicted RBP18.79■□□□□ 0.6
SCARB2-213ENST00000638680 OR52K1Q8NGK4 314 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 MRPL39Q9NYK5 338 aaKnown RBP18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ASTN2O75129 1339 aaPredicted RBP18.79■□□□□ 0.6
SCARB2-213ENST00000638680 PPP2R1BP30154 601 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 RPL22P35268 128 aaKnown RBP18.79■□□□□ 0.6
SCARB2-213ENST00000638680 ATP13A4Q4VNC1 1196 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 GLT6D1Q7Z4J2 308 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 LNPEPQ9UIQ6 1025 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 COMMD3-BMI1R4GMX3 469 aa18.79■□□□□ 0.6
SCARB2-213ENST00000638680 CD3EAPO15446 510 aaKnown RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 PIAS1O75925 651 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ALDH1A2O94788 518 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ANXA6P08133 673 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 C15orf59Q2T9L4 293 aaPredicted RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ST13P5Q8NFI4 369 aaPredicted RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 FAM45AQ8TCE6 357 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 MTFMTQ96DP5 389 aaKnown RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 RGS14O43566 566 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 TBX4P57082 545 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 AMPD2Q01433 879 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ARMC3Q5W041 872 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 MRPL48Q96GC5 212 aaKnown RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ALG9Q9H6U8 611 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 SLCO1B3Q9NPD5 702 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 TRPM5Q9NZQ8 1165 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 IPPQ9Y573 584 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ASTN1O14525 1302 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 OR1E1P30953 314 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 RXRGP48443 463 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 NR1D2Q14995 579 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ZIK1Q3SY52 487 aaPredicted RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 NEK10Q6ZWH5 1172 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 CORO1CQ9ULV4 474 aaPredicted RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 PDE9AO76083 593 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 KCNH1O95259 989 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 VPS72Q15906 364 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 EML3Q32P44 896 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 KRT73Q86Y46 540 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 TSPAN19P0C672 248 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 GRK3P35626 688 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 NR1H2P55055 460 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 SQLEQ14534 574 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 IL17AQ16552 155 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF621Q6ZSS3 439 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 HERC6Q8IVU3 1022 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 BPIFB6Q8NFQ5 453 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF483Q8TF39 744 aaPredicted RBP18.78■□□□□ 0.6
SCARB2-213ENST00000638680 SERAC1Q96JX3 654 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 ARHGEF3Q9NR81 526 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 RAD18Q9NS91 495 aa18.78■□□□□ 0.6
SCARB2-213ENST00000638680 MYL12AP19105 171 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 RPL5P46777 297 aaKnown RBP18.77■□□□□ 0.6
SCARB2-213ENST00000638680 ATP12AP54707 1039 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 NAGLUP54802 743 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 CASP7P55210 303 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 PSME3P61289 254 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 TSEN34Q9BSV6 310 aaKnown RBP18.77■□□□□ 0.6
SCARB2-213ENST00000638680 LOC100506127A0A0U1RQW1 187 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 CLTBP09497 229 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 INSRRP14616 1297 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF7P17097 686 aaPredicted RBP18.77■□□□□ 0.6
SCARB2-213ENST00000638680 MFSD4BQ5TF39 518 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 C1orf186Q6ZWK4 172 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 CLEC4MQ9H2X3 399 aaPredicted RBP18.77■□□□□ 0.6
SCARB2-213ENST00000638680 ENOPH1Q9UHY7 261 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 FOLH1Q04609 750 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 SDE2Q6IQ49 451 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 ADHFE1Q8IWW8 467 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms