RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FKBP14Q9NWM8 211 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 COPG2Q9UBF2 871 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 USTQ9Y2C2 406 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 PCDHB12Q9Y5F1 795 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 A0A1W2PQ67 120 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TMEM191CA6NGB0 347 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 C9IYK1 514 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 PI4K2BG5E9Z4 385 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 POLRMTO00411 1230 aaKnown RBP12.24□□□□□ -0.45
CAPN3-221ENST00000638141 PAPSS1O43252 624 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TMEM191BP0C7N4 346 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 PTGER2P43116 358 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 MRPS9P82933 396 aaKnown RBP12.24□□□□□ -0.45
CAPN3-221ENST00000638141 CNTN2Q02246 1040 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 SELPLGQ14242 412 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TRIM25Q14258 630 aaKnown RBP12.24□□□□□ -0.45
CAPN3-221ENST00000638141 MTX3Q5HYI7 312 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TTBK2Q6IQ55 1244 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 ABRAXAS1Q6UWZ7 409 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TFAP2DQ7Z6R9 452 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 ZFPM1Q8IX07 1006 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 CTAGE3PQ8IX95 158 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
CAPN3-221ENST00000638141 LRTOMTQ8WZ04 291 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TTC9Q92623 222 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 ZUFSPQ96AP4 578 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 MAGED4Q96JG8 741 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 CLSTN3Q9BQT9 956 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 CBWD1Q9BRT8 395 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 ADI1Q9BV57 179 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 AMNQ9BXJ7 453 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 PCIF1Q9H4Z3 704 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 EFCAB1Q9HAE3 211 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 C1orf112Q9NSG2 853 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TBC1D14Q9P2M4 693 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 RABL2AQ9UBK7 228 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-221ENST00000638141 EMCNQ9ULC0 261 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 TESMINQ9Y4I5 508 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 PCDHGA3Q9Y5H0 932 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 PTPRFP10586 1907 aa12.24□□□□□ -0.45
CAPN3-221ENST00000638141 IGLV3-22A0A075B6J6 115 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 HMX2A2RU54 273 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 FAM159BA6NKW6 160 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 CALB1P05937 261 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 ADRB2P07550 413 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 KRT3P12035 628 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 PRKCAP17252 672 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 GRM5P41594 1212 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 GRIA3P42263 894 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 GDF10P55107 478 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 NME3Q13232 169 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 LRIT3Q3SXY7 679 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 PPP6R3Q5H9R7 873 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-221ENST00000638141 GJC2Q5T442 439 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-221ENST00000638141 UGT3A1Q6NUS8 523 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 CHSY3Q70JA7 882 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 CAMK1DQ8IU85 385 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 ANKRD13AQ8IZ07 590 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 ABRAQ8N0Z2 381 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 DAW1Q8N136 415 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 NRBF2Q96F24 287 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 MFSD14AQ96MC6 490 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 FBXL18Q96ME1 805 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 TCF12Q99081 682 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 MMP19Q99542 508 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 DHRS9Q9BPW9 319 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 BCL7BQ9BQE9 202 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 RNF38Q9H0F5 515 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 SPON1Q9HCB6 807 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 SMOXQ9NWM0 555 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 GAKO14976 1311 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-221ENST00000638141 VWA5AO00534 786 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 DLGAP1O14490 977 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 HOXC11O43248 304 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-221ENST00000638141 DYRK3O43781 588 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 TAF1P21675 1872 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 PRKACBP22694 351 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 RFC1P35251 1148 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-221ENST00000638141 PSMC5P62195 406 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 CTAG1AP78358 180 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 DPYSL3Q14195 570 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
CAPN3-221ENST00000638141 ERFEQ4G0M1 354 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 HMBOX1Q6NT76 420 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 CYS1Q717R9 158 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 ACTL9Q8TC94 416 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 SLC7A3Q8WY07 619 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 SEPT8Q92599 483 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 KAT6AQ92794 2004 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 BTN2A3PQ96KV6 586 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 SNX18Q96RF0 628 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 C11orf70Q9BRQ4 267 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 COG4Q9H9E3 785 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 POPDC2Q9HBU9 364 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 TCF7L2Q9NQB0 619 aa12.23□□□□□ -0.45
CAPN3-221ENST00000638141 FBXO8Q9NRD0 319 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms