RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CCNCP24863 283 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 SDHAF4Q5VUM1 108 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 ATPAF2Q8N5M1 289 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 INPP5DQ92835 1189 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 UTP4Q969X6 686 aaKnown RBP21.96■■□□□ 1.11
CLN6-224ENST00000638076 SKA1Q96BD8 255 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 TBC1D31Q96DN5 1066 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 RAB3IPQ96QF0 476 aaPredicted RBP21.96■■□□□ 1.11
CLN6-224ENST00000638076 ZCWPW1Q9H0M4 648 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 SAR1AQ9NR31 198 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 FBXO6Q9NRD1 293 aaPredicted RBP21.96■■□□□ 1.11
CLN6-224ENST00000638076 TBC1D13Q9NVG8 400 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 AOC2O75106 756 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 OAZ2O95190 189 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 MOCS2O96007 188 aaPredicted RBP21.96■■□□□ 1.11
CLN6-224ENST00000638076 GSRP00390 522 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 TYK2P29597 1187 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 HOXC13P31276 330 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 NPY2RP49146 381 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 ZBTB16Q05516 673 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 MANEALQ5VSG8 457 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 ZCCHC23Q6ZST2 131 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 CCDC91Q7Z6B0 441 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 TSGA13Q96PP4 275 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 AGAP2Q99490 1192 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 C20orf27Q9GZN8 174 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 CATSPERBQ9H7T0 1116 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 CHRAC1Q9NRG0 131 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 DNAJB4Q9UDY4 337 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 SRRDQ9UH36 339 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 DCDC2Q9UHG0 476 aa21.96■■□□□ 1.11
CLN6-224ENST00000638076 FGF10O15520 208 aaPredicted RBP21.95■■□□□ 1.1
CLN6-224ENST00000638076 SNNO75324 88 aaPredicted RBP21.95■■□□□ 1.1
CLN6-224ENST00000638076 FASTKD1Q53R41 847 aaKnown RBP21.95■■□□□ 1.1
CLN6-224ENST00000638076 PPM1JQ5JR12 505 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 NAPEPLDQ6IQ20 393 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 ARID3BQ8IVW6 561 aaPredicted RBP21.95■■□□□ 1.1
CLN6-224ENST00000638076 DCP1BQ8IZD4 617 aaKnown RBP21.95■■□□□ 1.1
CLN6-224ENST00000638076 IL22Q9GZX6 179 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 NDFIP2Q9NV92 336 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 OSER1Q9NX31 292 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 MAGEB16A2A368 324 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 HAUS5O94927 633 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 F7P08709 466 aaPredicted RBP21.95■■□□□ 1.1
CLN6-224ENST00000638076 GPR15P49685 360 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 RASSF2P50749 326 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 FAM189BP81408 668 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 CDH17Q12864 832 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 PPP2R5DQ14738 602 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 ARTNQ5T4W7 220 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 STRA8Q7Z7C7 330 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 MAGEC3Q8TD91 643 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 ATXN7L3BQ96GX2 97 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 RBBP8Q99708 897 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 SLC39A8Q9C0K1 460 aa21.95■■□□□ 1.1
CLN6-224ENST00000638076 FRMPD3Q5JV73 1810 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 TMEM189-UBE2V1I3L0A0 370 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 DNAJC6O75061 913 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 KITP10721 976 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 HTR7P34969 479 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 STX3Q13277 289 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 FRG1Q14331 258 aaKnown RBP21.94■■□□□ 1.1
CLN6-224ENST00000638076 DDR2Q16832 855 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 HSP90AA5PQ58FG0 334 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 TEDDM1Q5T9Z0 273 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 DCLK2Q8N568 766 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 LZTR1Q8N653 840 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 SPATA22Q8NHS9 363 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 PRR11Q96HE9 360 aaPredicted RBP21.94■■□□□ 1.1
CLN6-224ENST00000638076 FAM193BQ96PV7 902 aaPredicted RBP21.94■■□□□ 1.1
CLN6-224ENST00000638076 TTC3P53804 2025 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 MOXD2PA6NHM9 499 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 CACNG3O60359 315 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 PLIN3O60664 434 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 MAFKO60675 156 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 SPRP35270 261 aaPredicted RBP21.94■■□□□ 1.1
CLN6-224ENST00000638076 TUBP50607 506 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 CRLF3Q8IUI8 442 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 PPP1R14CQ8TAE6 165 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 AZIN2Q96A70 460 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 ZNF419Q96HQ0 510 aaPredicted RBP21.94■■□□□ 1.1
CLN6-224ENST00000638076 SNX15Q9NRS6 342 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 KCNK4Q9NYG8 393 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 MARCOQ9UEW3 520 aaPredicted RBP21.94■■□□□ 1.1
CLN6-224ENST00000638076 SOX13Q9UN79 622 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 HS3ST4Q9Y661 456 aa21.94■■□□□ 1.1
CLN6-224ENST00000638076 KCNU1A8MYU2 1149 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 E9PAM4 449 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 GRK4P32298 578 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 RPL10AP62906 217 aaKnown RBP21.93■■□□□ 1.1
CLN6-224ENST00000638076 CMC1Q7Z7K0 106 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 LINC00523Q86TU6 105 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 KCNMB4Q86W47 210 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 NUP93Q8N1F7 819 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 SERPINB11Q96P15 392 aa21.93■■□□□ 1.1
CLN6-224ENST00000638076 C20orf96Q9NUD7 363 aaPredicted RBP21.93■■□□□ 1.1
CLN6-224ENST00000638076 AAR2Q9Y312 384 aaKnown RBP21.93■■□□□ 1.1
CLN6-224ENST00000638076 TADA2AO75478 443 aa21.92■■□□□ 1.1
CLN6-224ENST00000638076 MT-CYBP00156 380 aaPredicted RBP21.92■■□□□ 1.1
CLN6-224ENST00000638076 KCNA4P22459 653 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms