RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ZNF557Q8N988 423 aaPredicted RBP19.66■□□□□ 0.74
CACNA1A-257ENST00000638009 SERPINE1P05121 402 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 CYP2C9P11712 490 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ACAT1P24752 427 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ABRQ12979 859 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 TOMM20Q15388 145 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 KLHL23Q8NBE8 558 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 C7orf25Q9BPX7 421 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 CYP1A1P04798 512 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 EPHB2P29323 1055 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ALDH7A1P49419 539 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ZNF549Q6P9A3 640 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 TMPRSS11AQ6ZMR5 421 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 NEUROD4Q9HD90 331 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 USP17L5A8MUK1 530 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 MCIDASD6RGH6 385 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 FAM189A2Q15884 450 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 SFRP1Q8N474 314 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ANKS1AQ92625 1134 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 TTYH1Q9H313 450 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 GRIN2AQ12879 1464 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 FBXO21O94952 628 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 GSTT2BP0CG30 244 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 CPA3P15088 417 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 AVPR1AP37288 418 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 UGT2B15P54855 530 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 EMC1Q8N766 993 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 PSMA1P25786 263 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 MYBPC1Q00872 1141 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 MFSD7Q6UXD7 560 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 SLFN11Q7Z7L1 901 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 FBXO39Q8N4B4 442 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ANGPT4Q9Y264 503 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 NCF1BA6NI72 391 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 NCF1CA8MVU1 366 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 NCF1P14598 390 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 SMTNL2Q2TAL5 461 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 DALRD3Q5D0E6 543 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 SHQ1Q6PI26 577 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 PLEKHG4BQ96PX9 1271 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 NIF3L1Q9GZT8 377 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 AGAP1Q9UPQ3 857 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 FAM240BA0A1B0GVZ2 78 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ERVV-1B6SEH8 477 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 LRIG2O94898 1065 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 FAR1Q8WVX9 515 aa19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 TRMT13Q9NUP7 481 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-257ENST00000638009 ADORA1P30542 326 aa19.64■□□□□ 0.74
CACNA1A-257ENST00000638009 AK5Q9Y6K8 562 aa19.64■□□□□ 0.74
CACNA1A-257ENST00000638009 MTA2O94776 668 aa19.64■□□□□ 0.74
CACNA1A-257ENST00000638009 USP17L8P0C7I0 530 aa19.64■□□□□ 0.74
CACNA1A-257ENST00000638009 URADA6NGE7 173 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 ZNF208O43345 1280 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 RNF44Q7L0R7 432 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 MORF4L1Q9UBU8 362 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 MROH7-TTC4A0A0A0MT08 1334 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 USP17L10C9JJH3 530 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 IDH2P48735 452 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 NET1Q7Z628 596 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 SLC4A11Q8NBS3 891 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 ZNF518BQ9C0D4 1074 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 GRIP2Q9C0E4 1043 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 CLUP10909 449 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 USP46P62068 366 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 MIIPQ5JXC2 388 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 SPANXN3Q5MJ09 141 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 CD302Q8IX05 232 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 DNAJC10Q8IXB1 793 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 ANKZF1Q9H8Y5 726 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 TRPV5Q9NQA5 729 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 RAG1P15918 1043 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 ACAP2Q15057 778 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 PTPN21Q16825 1174 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 XKR3Q5GH77 459 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 SULT1C3Q6IMI6 304 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 SPAG4Q9NPE6 437 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 MRPS7Q9Y2R9 242 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 TPD52L2O43399 206 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 NOL4O94818 638 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 PRKCEQ02156 737 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 RAB43Q86YS6 212 aa19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 ATXN2LQ8WWM7 1075 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 MRTO4Q9UKD2 239 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-257ENST00000638009 TMEM253P0C7T8 217 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 SLC2A4P14672 509 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 PTPRKQ15262 1439 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 ADAM8P78325 824 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 PSMD5Q16401 504 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 TPCN2Q8NHX9 752 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 MTG1Q9BT17 334 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 ZNF224Q9NZL3 707 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 CABIN1Q9Y6J0 2220 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 MBTD1Q05BQ5 628 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 RFTN2Q52LD8 501 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 ADSSL1Q8N142 457 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 ZNF548Q8NEK5 533 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 OR5F1O95221 314 aa19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 LSM8O95777 96 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-257ENST00000638009 COMTP21964 271 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms