RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 NEU3Q9UQ49 428 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 SIK3Q9Y2K2 1263 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.09□□□□□ -1.11
PNKP-229ENST00000637897 PAXBP1Q9Y5B6 917 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 DMXL2Q8TDJ6 3036 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 CHD5Q8TDI0 1954 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 SYNJ2BP-COX16A0A087WUM0 186 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 A0A1B0GVT2 93 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 F8VZ95 297 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 PES1O00541 588 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 MID1O15344 667 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 MED7O43513 233 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 SYNCRIPO60506 623 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 HSF2BPO75031 334 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 MFAP3LO75121 409 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 PAGE1O75459 146 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 ZNF821O75541 412 aaPredicted RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 CD160O95971 181 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 CYP1A1P04798 512 aaPredicted RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 TNNT1P13805 278 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 PDGFRAP16234 1089 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 POLR2EP19388 210 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 FECHP22830 423 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 CSNK1EP49674 416 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 CXCR3P49682 368 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 GALCP54803 685 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 ADKP55263 362 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 NOMO3P69849 1222 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 FMO1Q01740 532 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 TSR1Q2NL82 804 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 KIF19Q2TAC6 998 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 TAF3Q5VWG9 929 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 DAB2IPQ5VWQ8 1189 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 E4F1Q66K89 784 aaPredicted RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 OR6B2Q6IFH4 312 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 NYAP1Q6ZVC0 841 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 SLCO6A1Q86UG4 719 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 TMTC1Q8IUR5 882 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 TMEM139Q8IV31 216 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 RGL4Q8IZJ4 473 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 STK40Q8N2I9 435 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 CEP76Q8TAP6 659 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 PGAP3Q96FM1 320 aaPredicted RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 C16orf45Q96MC5 204 aaPredicted RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 ERGIC2Q96RQ1 377 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 TBCBQ99426 244 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 PABPC3Q9H361 631 aaKnown RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 TM9SF3Q9HD45 589 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
PNKP-229ENST00000637897 DDIT4Q9NX09 232 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 COX16Q9P0S2 106 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 ARHGAP20Q9P2F6 1191 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 ANGPTL2Q9UKU9 493 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 VANGL2Q9ULK5 521 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 BTBD3Q9Y2F9 522 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 ACTL7AQ9Y615 435 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 TP53BP1Q12888 1972 aaPredicted RBP8.08□□□□□ -1.12
PNKP-229ENST00000637897 CHD6Q8TD26 2715 aa8.08□□□□□ -1.12
PNKP-229ENST00000637897 IGLV3-10A0A075B6K4 115 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 A0A0D9SEW6 157 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 A0A1B0GTW7 788 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 A0A1W2PP55 124 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 A0A1W2PQJ5 194 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 A0A1W2PR77 199 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 TCRBV5S1A1TA0A578 114 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 DRGXA6NNA5 263 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 K7ERQ8 282 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 M0QYT0 321 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 TAF4O00268 1085 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 CAPN9O14815 690 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 BCAT2O15382 392 aaPredicted RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 SMAD6O43541 496 aaKnown RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 HYAL3O43820 417 aaPredicted RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 SNAP91O60641 907 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 NDUFS2O75306 463 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 DKK1O94907 266 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 ENDOD1O94919 500 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 SEMA4FO95754 770 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 GYPCP04921 128 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 CTSLP07711 333 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 GLDCP23378 1020 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 OXTRP30559 389 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 CASP14P31944 242 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 NOS2P35228 1153 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 MATKP42679 507 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 TAS2R38P59533 333 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 PPP2CBP62714 309 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 PPP2CAP67775 309 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 CDK17Q00537 523 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 ECT2LQ008S8 904 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 PTK2Q05397 1052 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 GFPT1Q06210 699 aaPredicted RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 FOXC1Q12948 553 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 NME3Q13232 169 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 CST6Q15828 149 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 HLA-BQ31612 363 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 FIGNQ5HY92 759 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 EFHC1Q5JVL4 640 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 PRAMEF14Q5SWL7 426 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms