RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TBC1D3LB9A6J9 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 ATP9BO43861 1147 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3HP0C7X1 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 NOS2P35228 1153 aa19■□□□□ 0.63
CLN6-220ENST00000637450 IRAK1P51617 712 aa19■□□□□ 0.63
CLN6-220ENST00000637450 METAP1P53582 386 aa19■□□□□ 0.63
CLN6-220ENST00000637450 NME3Q13232 169 aa19■□□□□ 0.63
CLN6-220ENST00000637450 ZNF177Q13360 481 aaPredicted RBP19■□□□□ 0.63
CLN6-220ENST00000637450 C5orf22Q49AR2 442 aa19■□□□□ 0.63
CLN6-220ENST00000637450 PTPN20Q4JDL3 420 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3GQ6DHY5 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3CQ6IPX1 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 LRSAM1Q6UWE0 723 aa19■□□□□ 0.63
CLN6-220ENST00000637450 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19■□□□□ 0.63
CLN6-220ENST00000637450 SLC26A9Q7LBE3 791 aa19■□□□□ 0.63
CLN6-220ENST00000637450 C14orf80Q86SX3 495 aa19■□□□□ 0.63
CLN6-220ENST00000637450 SLC47A2Q86VL8 602 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3Q8IZP1 549 aaPredicted RBP19■□□□□ 0.63
CLN6-220ENST00000637450 OR52K2Q8NGK3 314 aa19■□□□□ 0.63
CLN6-220ENST00000637450 VANGL2Q9ULK5 521 aa19■□□□□ 0.63
CLN6-220ENST00000637450 LATO43561 262 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 PAGE1O75459 146 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 CLDN11O75508 207 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 DAB1O75553 588 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 SHBQ15464 509 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 INAVAQ3KP66 663 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 DPY19L2P1Q6NXN4 242 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 ZDHHC17Q8IUH5 632 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 FAM71AQ8IYT1 594 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 GALNT15Q8N3T1 639 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 SERAC1Q96JX3 654 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 KDM4CQ9H3R0 1056 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 SYNCQ9H7C4 482 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 RRN3Q9NYV6 651 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 SLC25A13Q9UJS0 675 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 SARDHQ9UL12 918 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 PPM1HQ9ULR3 514 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D30Q9Y2I9 924 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 CELSR3Q9NYQ7 3312 aa18.99■□□□□ 0.63
CLN6-220ENST00000637450 PLXNB3Q9ULL4 1909 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 M0QYT0 321 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 TLR4O00206 839 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 SLC7A4O43246 635 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
CLN6-220ENST00000637450 CDH4P55283 916 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 BPIFB4P59827 614 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 PPP2CBP62714 309 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 PPP2CAP67775 309 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 DLG2Q15700 870 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 SMAD1Q15797 465 aaKnown RBP18.98■□□□□ 0.63
CLN6-220ENST00000637450 MAN2A1Q16706 1144 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 TPD52L1Q16890 204 aaPredicted RBP18.98■□□□□ 0.63
CLN6-220ENST00000637450 ACCSLQ4AC99 568 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 OTUD1Q5VV17 481 aaPredicted RBP18.98■□□□□ 0.63
CLN6-220ENST00000637450 FAM46CQ5VWP2 391 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 DSG4Q86SJ6 1040 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 GATAD2AQ86YP4 633 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 MDM1Q8TC05 714 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 SAP25Q8TEE9 199 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 OR8D1Q8WZ84 308 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 NT5C3BQ969T7 300 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 NPY6RQ99463 290 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 PLCB1Q9NQ66 1216 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 GDF3Q9NR23 364 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 PIGVQ9NUD9 493 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 ARHGEF38Q9NXL2 777 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 ARHGAP20Q9P2F6 1191 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 FTSJ1Q9UET6 329 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 LHX6Q9UPM6 363 aa18.98■□□□□ 0.63
CLN6-220ENST00000637450 NBEAQ8NFP9 2946 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 PLK4O00444 970 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 MCF2LO15068 1137 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 ALOX15BO15296 676 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 PLRG1O43660 514 aaKnown RBP18.97■□□□□ 0.63
CLN6-220ENST00000637450 RTN2O75298 545 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 ADCY5O95622 1261 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 GGCXP38435 758 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 CXCR3P49682 368 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 NXPH1P58417 271 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 SLC45A4Q5BKX6 768 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 MARCH9Q86YJ5 346 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 TKTL2Q9H0I9 626 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 SIK2Q9H0K1 926 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 NDST4Q9H3R1 872 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 WDCPQ9H6R7 721 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 ANLNQ9NQW6 1124 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.97■□□□□ 0.63
CLN6-220ENST00000637450 VPS28Q9UK41 221 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 GPSM3Q9Y4H4 160 aa18.97■□□□□ 0.63
CLN6-220ENST00000637450 I6L893 689 aaPredicted RBP18.96■□□□□ 0.63
CLN6-220ENST00000637450 YKT6O15498 198 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 CNTN5O94779 1100 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 ITGAVP06756 1048 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 TFE3P19532 575 aaPredicted RBP18.96■□□□□ 0.63
CLN6-220ENST00000637450 CDH5P33151 784 aaPredicted RBP18.96■□□□□ 0.63
CLN6-220ENST00000637450 GABRB2P47870 512 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 RNASE9P60153 205 aaKnown RBP18.96■□□□□ 0.63
CLN6-220ENST00000637450 CNTN1Q12860 1018 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 CAMK2BQ13554 666 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 VWA3BQ502W6 1294 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms