RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 URGCPQ8TCY9 931 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 CENPIQ92674 756 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 TMA16Q96EY4 203 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 CDRT15Q96T59 188 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 C11orf84Q9BUA3 381 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 SUDS3Q9H7L9 328 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 NEMP2A6NFY4 417 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 DFFAO00273 331 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 ZNF195O14628 629 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 IL1BP01584 269 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 CYP2C9P11712 490 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 PDK1Q15118 436 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 KIAA0319Q5VV43 1072 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 HASPINQ8TF76 798 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 NFKBIZQ9BYH8 718 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 GCOM2Q9BZD3 368 aaPredicted RBP14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 NMRAL1Q9HBL8 299 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 CYP4F12Q9HCS2 524 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 CCDC160A6NGH7 325 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 ASB14A6NK59 587 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 ALDH1A2O94788 518 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 PLK1P53350 603 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 KLF10Q13118 480 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 MPP3Q13368 585 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 MSLNQ13421 630 aaPredicted RBP14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 USP10Q14694 798 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 ANKRD20A4Q4UJ75 823 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 KCNMB4Q86W47 210 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 GPC2Q8N158 579 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 SLC16A10Q8TF71 515 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 GORASP1Q9BQQ3 440 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 TCF7L2Q9NQB0 619 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 ASB3Q9Y575 518 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 SHROOM3Q8TF72 1996 aa14.32□□□□□ -0.12
CACNA1A-228ENST00000636610 PIGNO95427 931 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 ATP6V1B1P15313 513 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 TSPAN8P19075 237 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 CD68P34810 354 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 GJA5P36382 358 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 BIRC2Q13490 618 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 NOMO2Q5JPE7 1267 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 SLC41A1Q8IVJ1 513 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 ANKRD13AQ8IZ07 590 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 LINC01465Q8N7H1 131 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 VPS39Q96JC1 886 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 RUVBL2Q9Y230 463 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 MYBPHLA2RUH7 354 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 SNAI1O95863 264 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 NELFEP18615 380 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 HDCP19113 662 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 SPRP35270 261 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 GARSP41250 739 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 SNX16P57768 344 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 LILRA4P59901 499 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 MPP1Q00013 466 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 MED21Q13503 144 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 ARL13AQ5H913 290 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 STEAP4Q687X5 459 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 NOTUMQ6P988 496 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 TIFABQ6ZNK6 161 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 IPMKQ8NFU5 416 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 PPTC7Q8NI37 304 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 LPPQ93052 612 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 RCN3Q96D15 328 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 NMD3Q96D46 503 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 CMTM5Q96DZ9 223 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 RBBP8Q99708 897 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 G3V2L1 256 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 HNRNPLP14866 589 aaKnown RBP eCLIP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 GSTT1P30711 240 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 SOX11P35716 441 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 GRIA4P48058 902 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 TAF6P49848 677 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 POU5F1BQ06416 359 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 LSM12Q3MHD2 195 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 PAQR9Q6ZVX9 377 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 PIP4K2CQ8TBX8 421 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 MLPHQ9BV36 600 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 CDH19Q9H159 772 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 COPS7BQ9H9Q2 264 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 CLIC5Q9NZA1 410 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 ZDHHC2Q9UIJ5 367 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 APPL1Q9UKG1 709 aa14.31□□□□□ -0.12
CACNA1A-228ENST00000636610 ZCWPW2A0A1B0GU75 182 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 CCL22O00626 93 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 TREHO43280 583 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 VAPBO95292 243 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 SETSIPP0DME0 302 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 XRCC1P18887 633 aaPredicted RBP14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 GRK2P25098 689 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 BEX3Q00994 111 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 BTKQ06187 659 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 FBXL19Q6PCT2 694 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 IYDQ6PHW0 289 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 LAYNQ6UX15 382 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 CLEC20AQ6ZU45 233 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms