RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 CXCL17Q6UXB2 119 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 NPNTQ6UXI9 565 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 HERC6Q8IVU3 1022 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RTL3Q8N8U3 475 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 DQX1Q8TE96 717 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 MYLK2Q9H1R3 596 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SMOC2Q9H3U7 446 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 GLOD4Q9HC38 313 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 CYTH4Q9UIA0 394 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RAP2CQ9Y3L5 183 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 HES2Q9Y543 173 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 DCDC2CA8MYV0 355 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ANKRD65E5RJM6 399 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PAPSS2O95340 614 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 BEX3Q00994 111 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SEPT6Q14141 434 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RFTN1Q14699 578 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 N4BP2L1Q5TBK1 243 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PXYLP1Q8TE99 480 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PCED1BQ96HM7 432 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RBBP8Q99708 897 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SLC25A51Q9H1U9 297 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CSNK1G1Q9HCP0 422 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MOCS1Q9NZB8 636 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SEPT3Q9UH03 358 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 C2orf81A6NN90 581 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 M0QZQ0 153 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 FCHO1O14526 889 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 FGF1P05230 155 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 EDN1P05305 212 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ART3Q13508 389 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NAA25Q14CX7 972 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 UBXN11Q5T124 520 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 FAXCQ5TGI0 409 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SEL1L3Q68CR1 1132 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RETSATQ6NUM9 610 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PKN3Q6P5Z2 889 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PCYOX1LQ8NBM8 494 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 KBTBD7Q8WVZ9 684 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 DLG3Q92796 817 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 HMGXB4Q9UGU5 601 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 A0A1W2PQ67 120 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 KANSL1LA0AUZ9 987 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ARL5CA6NH57 179 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SYCE1LA8MT33 242 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CD48P09326 243 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 AQP5P55064 265 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 QPCTQ16769 361 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MTDHQ86UE4 582 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ITIH5Q86UX2 942 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ELMOD1Q8N336 334 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MPP5Q8N3R9 675 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NT5C3BQ969T7 300 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 FAM84AQ96KN4 292 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 B3GNT5Q9BYG0 378 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SENP6Q9GZR1 1112 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 EFCAB1Q9HAE3 211 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 EURLQ9NYK6 297 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 VGLL3A8MV65 326 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MFSD11O43934 449 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MOCS2O96007 188 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NCF2P19878 526 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 BGNP21810 368 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ATP5F1P24539 256 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PBX3P40426 434 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NEK3P51956 506 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 EPHB1P54762 984 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RING1Q06587 406 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ITGA7Q13683 1181 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PREPLQ4J6C6 727 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 TXNRD3NBQ6F5E7 133 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PM20D1Q6GTS8 502 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NET1Q7Z628 596 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RASAL3Q86YV0 1011 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 STK40Q8N2I9 435 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SLAIN1Q8ND83 568 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ELMO3Q96BJ8 720 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 TCF12Q99081 682 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 KLF6Q99612 283 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CCT7Q99832 543 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RNPEPL1Q9HAU8 725 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NDUFA13Q9P0J0 144 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SUN2Q9UH99 717 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 H3BMM5 538 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ASGR1P07306 291 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CSH1P0DML2 217 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CSH2P0DML3 217 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PSMB4P28070 264 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SLC1A6P48664 564 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SERPINH1P50454 418 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 BST1Q10588 318 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MMRN1Q13201 1228 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MMEL1Q495T6 779 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 FAM45BPQ6NSW5 357 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CLNKQ7Z7G1 428 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ECHDC2Q86YB7 292 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CPNE8Q86YQ8 564 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 FAM45AQ8TCE6 357 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RPRD1AQ96P16 312 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 C1orf21Q9H246 121 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms