RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 LRRIQ3A6PVS8 624 aaPredicted RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 AGRPO00253 132 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 PLD2O14939 933 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 MUSKO15146 869 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 HGFP14210 728 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 CD58P19256 250 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 WT1P19544 449 aaPredicted RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 SLC6A4P31645 630 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 ASPAP45381 313 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 STK19P49842 368 aaPredicted RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 CLDN2P57739 230 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 CNTN1Q12860 1018 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 FSCBQ5H9T9 825 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 PITRM1Q5JRX3 1037 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 ZCCHC8Q6NZY4 707 aaKnown RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 SHC4Q6S5L8 630 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 FBXO39Q8N4B4 442 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 TMEM145Q8NBT3 493 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 TPCN2Q8NHX9 752 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 HTR3CQ8WXA8 447 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 LIN37Q96GY3 246 aaPredicted RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 KDM4CQ9H3R0 1056 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 PLEKHB1Q9UF11 243 aaPredicted RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 SARDHQ9UL12 918 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 PLAAQ9Y263 795 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
CHD2-218ENST00000629346 ITPR2Q14571 2701 aa12.32□□□□□ -0.44
CHD2-218ENST00000629346 DOPEY1Q5JWR5 2465 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 ZFC3H1O60293 1989 aaKnown RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 EXOC3O60645 756 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 RNGTTO60942 597 aaKnown RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 TCEA3O75764 348 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 SRPRAP08240 638 aaKnown RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 UGT1A5P35504 534 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 ME1P48163 572 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 TKTL1P51854 596 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 PDX1P52945 283 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 HNRNPKP61978 463 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHD2-218ENST00000629346 RPS24P62847 133 aaKnown RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 ECT2LQ008S8 904 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 AMPD3Q01432 767 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 CDH18Q13634 790 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 SPIDRQ14159 915 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 ELAVL3Q14576 367 aaKnown RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 DEFB133Q30KQ1 61 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 ZNF394Q53GI3 561 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 MPP7Q5T2T1 576 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 PIGZQ86VD9 579 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 SLC22A18ASQ8N1D0 253 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 ZNF557Q8N988 423 aaPredicted RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 ZNF548Q8NEK5 533 aaPredicted RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 ZNF507Q8TCN5 953 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 PARD3BQ8TEW8 1205 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 DHX58Q96C10 678 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 HEXIM2Q96MH2 286 aaKnown RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 ULBP1Q9BZM6 244 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 MAGEF1Q9HAY2 307 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
CHD2-218ENST00000629346 SEPT10Q9P0V9 454 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
CHD2-218ENST00000629346 SPTBN1Q01082 2364 aaKnown RBP12.3□□□□□ -0.44
CHD2-218ENST00000629346 A0A1W2PQU0 124 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 EME2A4GXA9 379 aaPredicted RBP12.3□□□□□ -0.44
CHD2-218ENST00000629346 EIF3DO15371 548 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHD2-218ENST00000629346 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
CHD2-218ENST00000629346 SLC7A4O43246 635 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 MOCS3O95396 460 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 ZBED1O96006 694 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 LIPCP11150 499 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 AKT2P31751 481 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 CASRP41180 1078 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 AP3M2P53677 418 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 DLG4P78352 724 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 DNM1Q05193 864 aaKnown RBP12.3□□□□□ -0.44
CHD2-218ENST00000629346 NR0B2Q15466 257 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 FAM133BQ5BKY9 247 aaKnown RBP12.3□□□□□ -0.44
CHD2-218ENST00000629346 AGBL4Q5VU57 503 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 CNNM4Q6P4Q7 775 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 Q6ZSR6 202 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 RAB11FIP2Q7L804 512 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 B3GNT8Q7Z7M8 397 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 DSG4Q86SJ6 1040 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
CHD2-218ENST00000629346 APCDD1Q8J025 514 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 CFAP52Q8N1V2 620 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 HJURPQ8NCD3 748 aaPredicted RBP12.3□□□□□ -0.44
CHD2-218ENST00000629346 MYEOVQ96EZ4 313 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 FAM13BQ9NYF5 915 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 NCKIPSDQ9NZQ3 722 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 PCDHGA7Q9Y5G6 932 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 ITIH6Q6UXX5 1313 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 CENPEQ02224 2701 aa12.3□□□□□ -0.44
CHD2-218ENST00000629346 ICE1Q9Y2F5 2266 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms