RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CBWD1Q9BRT8 395 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PANK4Q9NVE7 773 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 TRPM5Q9NZQ8 1165 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KCND2Q9NZV8 630 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 UXTQ9UBK9 157 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PCDHGA5Q9Y5G8 931 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 NUMA1Q14980 2115 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 LRRC53A6NM62 1247 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 F8VP50 259 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ERLIN1O75477 346 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 NFATC1O95644 943 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SCGB1D2O95969 90 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 GHRHP01286 108 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CYP11A1P05108 521 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 MBL2P11226 248 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PRLRP16471 622 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 LMO2P25791 158 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SLC6A11P48066 632 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 MLLT6P55198 1093 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 FKBP3Q00688 224 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SLC7A5Q01650 507 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CKAP4Q07065 602 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 MMRN1Q13201 1228 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ANO4Q32M45 955 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF771Q7L3S4 317 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 HDXQ7Z353 690 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 OSTM1Q86WC4 334 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 TRIM59Q8IWR1 403 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PNPLA1Q8N8W4 532 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 OSCP1Q8WVF1 389 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SCFD1Q8WVM8 642 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC127Q96BQ5 260 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 NUSAP1Q9BXS6 441 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KIF9Q9HAQ2 790 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CFAP97Q9P2B7 532 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 TJP2Q9UDY2 1190 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 C2CD2Q9Y426 696 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PCDHA13Q9Y5I0 950 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CPQQ9Y646 472 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CAPN6Q9Y6Q1 641 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 DUSP10Q9Y6W6 482 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 TCRBV21S2A2A0A5A6 115 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 ALG1L2C9J202 215 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 H3BRJ5 948 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 SGK1O00141 431 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 ALDH1A2O94788 518 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 PRPF6O94906 941 aaKnown RBP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 IPO7O95373 1038 aaKnown RBP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 PROS1P07225 676 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 RHOXF2BP0C7M4 288 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 PCSK1P29120 753 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 ADSSP30520 456 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 HOXA6P31267 233 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 KIF5AQ12840 1032 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 EDRF1Q3B7T1 1238 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 MDH1BQ5I0G3 518 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 DPY19L2P1Q6NXN4 242 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 C19orf48Q6RUI8 117 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 DENND5BQ6ZUT9 1274 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 LPCAT2Q7L5N7 544 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 EPM2AIP1Q7L775 607 aaPredicted RBP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC65Q8IXS2 484 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 HDDC3Q8N4P3 179 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CHCHD4Q8N4Q1 142 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 TRIM58Q8NG06 486 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 OR6B3Q8NGW1 331 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 MYLPFQ96A32 169 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 MRGPRX3Q96LB0 322 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC42Q96M95 316 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 SYT15Q9BQS2 421 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 RHOXF2Q9BQY4 288 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 PRDM16Q9HAZ2 1276 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 ATP13A2Q9NQ11 1180 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 FAM207AQ9NSI2 230 aaPredicted RBP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 TMEM74BQ9NUR3 256 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 NXF1Q9UBU9 619 aaKnown RBP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CHORDC1Q9UHD1 332 aaPredicted RBP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 SNX12Q9UMY4 172 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 NUP205Q92621 2012 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 LEFTY2O00292 366 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 TRIM24O15164 1050 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 SRGAP2O75044 1071 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 GNA14O95837 355 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 HNRNPLP14866 589 aaKnown RBP eCLIP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 TNNI1P19237 187 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 DDX6P26196 483 aaKnown RBP eCLIP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 PNPLA4P41247 253 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 PPP2R2AP63151 447 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 GTF2BQ00403 316 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 MYO1EQ12965 1108 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF77Q15935 545 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CRY1Q16526 586 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 BMT2Q1RMZ1 405 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CRELD2Q6UXH1 353 aaPredicted RBP5.05□□□□□ -1.6
LINC00550-201ENST00000629293 CREG2Q8IUH2 290 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 USP33Q8TEY7 942 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 HPDLQ96IR7 371 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 ANKRD36BP1Q96IX9 119 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 GANQ9H2C0 597 aa5.05□□□□□ -1.6
LINC00550-201ENST00000629293 FBRSQ9HAH7 460 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms