RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 CREBRFQ8IUR6 639 aa19.54■□□□□ 0.72
SMN2-215ENST00000628696 DEFB106AQ8N104 65 aa19.54■□□□□ 0.72
SMN2-215ENST00000628696 OR8D1Q8WZ84 308 aa19.54■□□□□ 0.72
SMN2-215ENST00000628696 SPAG5Q96R06 1193 aa19.54■□□□□ 0.72
SMN2-215ENST00000628696 PRMT1Q99873 361 aaKnown RBP19.54■□□□□ 0.72
SMN2-215ENST00000628696 DDIT4Q9NX09 232 aa19.54■□□□□ 0.72
SMN2-215ENST00000628696 SLC25A13Q9UJS0 675 aa19.54■□□□□ 0.72
SMN2-215ENST00000628696 TPX2Q9ULW0 747 aaKnown RBP19.54■□□□□ 0.72
SMN2-215ENST00000628696 SHROOM3Q8TF72 1996 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 ARID1BQ8NFD5 2236 aaPredicted RBP19.53■□□□□ 0.72
SMN2-215ENST00000628696 A0A1B0GVM2 712 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 TCAF2A6NFQ2 919 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 EIF4E1BA6NMX2 242 aaKnown RBP19.53■□□□□ 0.72
SMN2-215ENST00000628696 C10orf142B7Z368 130 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 E9PAM4 449 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 GRAP2O75791 330 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 C1SP09871 688 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 ZNF18P17022 549 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 CCR1P32246 355 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 OXCT1P55809 520 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 CENPCQ03188 943 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 PAK1Q13153 545 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 PDCLQ13371 301 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 MEA1Q16626 185 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 ARHGAP44Q17R89 818 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 C6orf118Q5T5N4 469 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 NAPEPLDQ6IQ20 393 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 FBXL22Q6P050 247 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 GJB7Q6PEY0 223 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 DSG4Q86SJ6 1040 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 ELOA2Q8IYF1 753 aaPredicted RBP19.53■□□□□ 0.72
SMN2-215ENST00000628696 MFSD2AQ8NA29 543 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 FRS2Q8WU20 508 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 CRELD1Q96HD1 420 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 RPRD1AQ96P16 312 aaPredicted RBP19.53■□□□□ 0.72
SMN2-215ENST00000628696 PPP1R9BQ96SB3 815 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 CRACR2AQ9BSW2 395 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 SARDHQ9UL12 918 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 AK5Q9Y6K8 562 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 IGSF10Q6WRI0 2623 aa19.53■□□□□ 0.72
SMN2-215ENST00000628696 TDRD6O60522 2096 aaKnown RBP19.52■□□□□ 0.72
SMN2-215ENST00000628696 LATO43561 262 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 BNIP3LO60238 219 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 CDK4P11802 303 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 ACADVLP49748 655 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 PLK1P53350 603 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 MORC3Q14149 939 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 STAT4Q14765 748 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 TTC39BQ5VTQ0 682 aaPredicted RBP19.52■□□□□ 0.72
SMN2-215ENST00000628696 FAM46CQ5VWP2 391 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 CXorf57Q6NSI4 855 aaKnown RBP19.52■□□□□ 0.72
SMN2-215ENST00000628696 FOXR2Q6PJQ5 311 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 SPATS2Q86XZ4 545 aaKnown RBP19.52■□□□□ 0.72
SMN2-215ENST00000628696 PASD1Q8IV76 773 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 OXR1Q8N573 874 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 NXPE2Q96DL1 559 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 BBC3Q96PG8 261 aaPredicted RBP19.52■□□□□ 0.72
SMN2-215ENST00000628696 ERVMER34-1Q9H9K5 563 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 VANGL2Q9ULK5 521 aa19.52■□□□□ 0.72
SMN2-215ENST00000628696 A0A087WV48 116 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.51■□□□□ 0.71
SMN2-215ENST00000628696 RXRGP48443 463 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 MARSP56192 900 aaKnown RBP19.51■□□□□ 0.71
SMN2-215ENST00000628696 SEMG2Q02383 582 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 CNTN1Q12860 1018 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 TARDBPQ13148 414 aaKnown RBP eCLIP19.51■□□□□ 0.71
SMN2-215ENST00000628696 NME3Q13232 169 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 ZNF177Q13360 481 aaPredicted RBP19.51■□□□□ 0.71
SMN2-215ENST00000628696 EIF4EBP2Q13542 120 aaPredicted RBP19.51■□□□□ 0.71
SMN2-215ENST00000628696 AUHQ13825 339 aaKnown RBP19.51■□□□□ 0.71
SMN2-215ENST00000628696 DLG2Q15700 870 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 EFHC1Q5JVL4 640 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 HES3Q5TGS1 186 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 OR6B2Q6IFH4 312 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 ENOSF1Q7L5Y1 443 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 PIP4K2CQ8TBX8 421 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 PPP1R13BQ96KQ4 1090 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 CPXM1Q96SM3 734 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 FEM1AQ9BSK4 669 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 KDM4CQ9H3R0 1056 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 ARHGAP20Q9P2F6 1191 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 VPS28Q9UK41 221 aa19.51■□□□□ 0.71
SMN2-215ENST00000628696 C1QTNF3-AMACRE9PGA6 284 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 SLC7A4O43246 635 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 PLRG1O43660 514 aaKnown RBP19.5■□□□□ 0.71
SMN2-215ENST00000628696 MAGEC1O60732 1142 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 FGFR1OPO95684 399 aaKnown RBP19.5■□□□□ 0.71
SMN2-215ENST00000628696 GLI1P08151 1106 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 GGCXP38435 758 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 ABCG1P45844 678 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 IRAK1P51617 712 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 Q6ZVU0 165 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 WDTC1Q8N5D0 677 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 OR52K2Q8NGK3 314 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 TSC1Q92574 1164 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 ALG14Q96F25 216 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 SLC2A13Q96QE2 648 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 SIK2Q9H0K1 926 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 DMTF1Q9Y222 760 aa19.5■□□□□ 0.71
SMN2-215ENST00000628696 CA5BQ9Y2D0 317 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms