RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 KIAA1328Q86T90 577 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 TXLNBQ8N3L3 684 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 DCAF4L2Q8NA75 395 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 KDM1BQ8NB78 822 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 MYO19Q96H55 970 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 MRGPRX3Q96LB0 322 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 PSMB7Q99436 277 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 DESI2Q9BSY9 194 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 C2orf49Q9BVC5 232 aaPredicted RBP20.82■□□□□ 0.92
PTCD3-220ENST00000627371 IRF2BPLQ9H1B7 796 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 CD248Q9HCU0 757 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 POLMQ9NP87 494 aaPredicted RBP20.82■□□□□ 0.92
PTCD3-220ENST00000627371 ERVW-1Q9UQF0 538 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 PLXND1Q9Y4D7 1925 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 H3BRJ5 948 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 KRT7P08729 469 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 ETFBP38117 255 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 NRLP54845 237 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 ST8SIA6P61647 398 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 POLNQ7Z5Q5 900 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 OR7D4Q8NG98 312 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 FAM71BQ8TC56 605 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 ANP32BQ92688 251 aaKnown RBP20.81■□□□□ 0.92
PTCD3-220ENST00000627371 CALR3Q96L12 384 aaKnown RBP20.81■□□□□ 0.92
PTCD3-220ENST00000627371 LACRTQ9GZZ8 138 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 CWC15Q9P013 229 aaKnown RBP20.81■□□□□ 0.92
PTCD3-220ENST00000627371 SALL4Q9UJQ4 1053 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 RAD54BQ9Y620 910 aa20.81■□□□□ 0.92
PTCD3-220ENST00000627371 CCDC163A0A0D9SF12 145 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 BUB1BO60566 1050 aaPredicted RBP20.8■□□□□ 0.92
PTCD3-220ENST00000627371 RAMP2O60895 175 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 ALDH1A2O94788 518 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 GJC1P36383 396 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 ARL4AP40617 200 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 VASPP50552 380 aaPredicted RBP20.8■□□□□ 0.92
PTCD3-220ENST00000627371 DMWDQ09019 674 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 DPYSQ14117 519 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 GSE1Q14687 1217 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 STARD3Q14849 445 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 C11orf63Q6NUN7 778 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 KIAA1211LQ6NV74 962 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 RASSF3Q86WH2 238 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 MAGEH1Q9H213 219 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 PCDH18Q9HCL0 1135 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 ZSCAN32Q9NX65 697 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 EBF1Q9UH73 591 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 VPS51Q9UID3 782 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 SLC25A13Q9UJS0 675 aa20.8■□□□□ 0.92
PTCD3-220ENST00000627371 ARIH1Q9Y4X5 557 aaPredicted RBP20.8■□□□□ 0.92
PTCD3-220ENST00000627371 TCRBV21S2A2A0A5A6 115 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 DAPK3O43293 454 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 SYNCRIPO60506 623 aaKnown RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 SNAP91O60641 907 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 EPHX1P07099 455 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 HLA-EP13747 358 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 ERCC2P18074 760 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 COMTP21964 271 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 STK19P49842 368 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 ARSEP51690 589 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 CDH6P55285 790 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 CCZ1BP86790 482 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 CCZ1P86791 482 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 KRT81Q14533 505 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 ATP13A4Q4VNC1 1196 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 UMODL1-AS1Q8N2C9 162 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 TPCN2Q8NHX9 752 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 TSC1Q92574 1164 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 ARHGEF2Q92974 986 aaKnown RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 RPL10LQ96L21 214 aaKnown RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 CSPG4P5Q96PW8 444 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 ACE2Q9BYF1 805 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 NOL6Q9H6R4 1146 aaKnown RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 ATP13A1Q9HD20 1204 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 RCOR3Q9P2K3 495 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-220ENST00000627371 RAPGEFL1Q9UHV5 662 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 ADGRG1Q9Y653 693 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 DUSP10Q9Y6W6 482 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 MYO15AQ9UKN7 3530 aa20.79■□□□□ 0.92
PTCD3-220ENST00000627371 BUB1O43683 1085 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 SPOPO43791 374 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 NRDCO43847 1150 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 ACVRL1P37023 503 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 NNMTP40261 264 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 PXNP49023 591 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-220ENST00000627371 FNTBP49356 437 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 YBEYP58557 167 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-220ENST00000627371 KIF5AQ12840 1032 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 POLD3Q15054 466 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-220ENST00000627371 LRRC38Q5VT99 294 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 HEATR6Q6AI08 1181 aaKnown RBP20.78■□□□□ 0.92
PTCD3-220ENST00000627371 IL31Q6EBC2 164 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 ANO7Q6IWH7 933 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 WDR5BQ86VZ2 330 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 LONP2Q86WA8 852 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 ZNF366Q8N895 744 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 ZBTB44Q8NCP5 570 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 MDGA1Q8NFP4 955 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 SPON2Q9BUD6 331 aa20.78■□□□□ 0.92
PTCD3-220ENST00000627371 KLHL11Q9NVR0 708 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms