RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ARMC2Q8NEN0 867 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 RNF139Q8WU17 664 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 P2RY11Q96G91 374 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ZNF333Q96JL9 665 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 TNIP3Q96KP6 325 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 REPIN1Q9BWE0 567 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 NMUR2Q9GZQ4 415 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PCDH12Q9NPG4 1184 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 FBXO6Q9NRD1 293 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 STX18Q9P2W9 335 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 DCDC2Q9UHG0 476 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 HTTP42858 3142 aa7.34□□□□□ -1.24
CTNNA1-244ENST00000627109 FAM237BA0A1B0GVD1 139 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 I6L893 689 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PTGESO14684 152 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 NCAM2O15394 837 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 XPOTO43592 962 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 KIF1CO43896 1103 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 FBXO21O94952 628 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 BAG2O95816 211 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PIM1P11309 404 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 CYP2C9P11712 490 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 NPR3P17342 541 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 SYN1P17600 705 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 HOXC13P31276 330 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 CRYBB1P53674 252 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PDE1CQ14123 709 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 KIZQ2M2Z5 673 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ZNF618Q5T7W0 954 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 CLEC20AQ6ZU45 233 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 MAVSQ7Z434 540 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 NET1Q7Z628 596 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 LCA5Q86VQ0 697 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 TMPRSS6Q8IU80 811 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 RNF169Q8NCN4 708 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 HDAC11Q96DB2 347 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ATXN7L3BQ96GX2 97 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 TSGA13Q96PP4 275 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PKMYT1Q99640 499 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 WWP1Q9H0M0 922 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 NEUROD4Q9HD90 331 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PCMTD2Q9NV79 361 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 RRN3Q9NYV6 651 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ARMCX1Q9P291 453 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ZCWPW2A0A1B0GU75 182 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 USP1O94782 785 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 LUC7L3O95232 432 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 SAT1P21673 171 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 AMPD1P23109 780 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 SH3BGRP55822 239 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 SESN2P58004 480 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PDE1BQ01064 536 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 KDSRQ06136 332 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 GALNT2Q10471 571 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PDK1Q15118 436 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 KHDC1Q4VXA5 237 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ACSBG2Q5FVE4 666 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 C6orf163Q5TEZ5 329 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 DSTYKQ6XUX3 929 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PIGZQ86VD9 579 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 MYLK4Q86YV6 388 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 DEFB106AQ8N104 65 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ZNF567Q8N184 647 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PYROXD2Q8N2H3 581 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 GSTCDQ8NEC7 633 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 APPL2Q8NEU8 664 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 TTC8Q8TAM2 541 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC2A14Q8TDB8 520 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 DEPDC1BQ8WUY9 529 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 CPNE1Q99829 537 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 MTG1Q9BT17 334 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 CEP41Q9BYV8 373 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 FAM96AQ9H5X1 160 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 GPAMQ9HCL2 828 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC4A7Q9Y6M7 1214 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ARHGAP42A6NI28 874 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 H3BRJ5 948 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 SIN3BO75182 1162 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ENTPD5O75356 428 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 TM7SF2O76062 418 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 AP2A1O95782 977 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ENO1P06733 434 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 NAT2P11245 290 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 DNAJB2P25686 324 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PRDX6P30041 224 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PTDSS1P48651 473 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 CDK7P50613 346 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ITGA7Q13683 1181 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PLEKHG6Q3KR16 790 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 GRTP1Q5TC63 336 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 PM20D1Q6GTS8 502 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 TTC7BQ86TV6 843 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 ARID3BQ8IVW6 561 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 TMEM151AQ8N4L1 468 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 COLGALT1Q8NBJ5 622 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 NRG4Q8WWG1 115 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 WNT8BQ93098 351 aa7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 NAF1Q96HR8 494 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-244ENST00000627109 TRIM56Q9BRZ2 755 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms