RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 DUSP28Q4G0W2 176 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CLEC20AQ6ZU45 233 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 TMEM135Q86UB9 458 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 MAPK15Q8TD08 544 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 SLC2A13Q96QE2 648 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CPSF2Q9P2I0 782 aaKnown RBP11.5□□□□□ -0.57
VARS2-213ENST00000625423 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CDY1Q9Y6F8 540 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 RRN3P2A6NIE6 340 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.5□□□□□ -0.57
VARS2-213ENST00000625423 GNAT1P11488 350 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CYP2C9P11712 490 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 TPH1P17752 444 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 PTPN1P18031 435 aaKnown RBP11.5□□□□□ -0.57
VARS2-213ENST00000625423 LPCAT4Q643R3 524 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 EPGNQ6UW88 154 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CTU1Q7Z7A3 348 aaKnown RBP11.5□□□□□ -0.57
VARS2-213ENST00000625423 NPWQ8N729 165 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 DNAJB3Q8WWF6 145 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 EBF3Q9H4W6 596 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CHRAC1Q9NRG0 131 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 ADAMTS6Q9UKP5 1117 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 POMPQ9Y244 141 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 AHCYL1O43865 530 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 LTFP02788 710 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 C2P06681 752 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 SMIM10L2AP0DMW4 78 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 SMIM10L2BP0DMW5 78 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 COX4I1P13073 169 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CD1EP15812 388 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CD68P34810 354 aaPredicted RBP11.5□□□□□ -0.57
VARS2-213ENST00000625423 TPI1P60174 286 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 BTKQ06187 659 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 TBL3Q12788 808 aaKnown RBP11.5□□□□□ -0.57
VARS2-213ENST00000625423 SNAPC2Q13487 334 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 ADGRG6Q86SQ4 1221 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 DPP9Q86TI2 863 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 ARRDC4Q8NCT1 418 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 URGCPQ8TCY9 931 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 PPP1R36Q96LQ0 422 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 TUBGCP5Q96RT8 1024 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 MLPHQ9BV36 600 aaPredicted RBP11.5□□□□□ -0.57
VARS2-213ENST00000625423 ULBP1Q9BZM6 244 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CASS4Q9NQ75 786 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 UBP1Q9NZI7 540 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 GOLGA8QA0A0J9YX86 632 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 CCDC78A2IDD5 438 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 GOLGA8OA6NCC3 632 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 YJEFN3A6XGL0 299 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 GOLGA8NF8WBI6 632 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 XPOTO43592 962 aaKnown RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 HOXD8P13378 290 aaPredicted RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 WARSP23381 471 aaKnown RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 PGGT1BP53609 377 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 ZBTB17Q13105 803 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 KLF10Q13118 480 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 KIAA0319Q5VV43 1072 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 CLEC14AQ86T13 490 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 KCNMB4Q86W47 210 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
VARS2-213ENST00000625423 TDRD5Q8NAT2 981 aaKnown RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 OR52B2Q96RD2 323 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 NMRAL1Q9HBL8 299 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 WDR6Q9NNW5 1121 aaKnown RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 PAPOLBQ9NRJ5 636 aaKnown RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 IARS2Q9NSE4 1012 aaKnown RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 C20orf96Q9NUD7 363 aaPredicted RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 CACNG4Q9UBN1 327 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 TRIM13O60858 407 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 MPOP05164 745 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 CHRNGP07510 517 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 KCNE1P15382 129 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 CYP2B6P20813 491 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 EPHX2P34913 555 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 SERPINB6P35237 376 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 MPP3Q13368 585 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 FSCBQ5H9T9 825 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 KCTD11Q693B1 232 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 PDZD4Q76G19 769 aaPredicted RBP11.49□□□□□ -0.57
VARS2-213ENST00000625423 FBXW8Q8N3Y1 598 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 KCTD13Q8WZ19 329 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 PPP2R3CQ969Q6 453 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 PDP2Q9P2J9 529 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 ARHGAP26Q9UNA1 814 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 SNX10Q9Y5X0 201 aa11.49□□□□□ -0.57
VARS2-213ENST00000625423 DYNC1LI2O43237 492 aaPredicted RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 RNASEH1O60930 286 aaKnown RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 NFKB1P19838 968 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SAT1P21673 171 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 PPIDQ08752 370 aaKnown RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 PPP2R5DQ14738 602 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SNX17Q15036 470 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SFT2D3Q587I9 215 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 UBXN11Q5T124 520 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SLC30A9Q6PML9 568 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 PDSS2Q86YH6 399 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms