RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SYTL3Q4VX76 610 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 HIST2H2AA3Q6FI13 130 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 FASTKD5Q7L8L6 764 aaKnown RBP9.06□□□□□ -0.96
VCL-206ENST00000623461 OR56A4Q8NGH8 313 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 NMUR2Q9GZQ4 415 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 MAP3K20Q9NYL2 800 aaKnown RBP9.06□□□□□ -0.96
VCL-206ENST00000623461 SYNDIG1LA6NDD5 238 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 PMPCBO75439 489 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 ASLP04424 464 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 DBTP11182 482 aaKnown RBP9.06□□□□□ -0.96
VCL-206ENST00000623461 CRHR1P34998 444 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 PPP3CCP48454 512 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 RUNDC3AQ59EK9 446 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 ZRANB3Q5FWF4 1079 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 C6orf52Q5T4I8 152 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 SAMD3Q8N6K7 520 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 UCMAQ8WVF2 138 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 TAMM41Q96BW9 452 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 MID1IP1Q9NPA3 183 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 KCNH7Q9NS40 1196 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 TMEM216Q9P0N5 145 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 FADS3Q9Y5Q0 445 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 RPS6KA4O75676 772 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 CYP1A1P04798 512 aaPredicted RBP9.06□□□□□ -0.96
VCL-206ENST00000623461 ZSCAN5DPP0CG00 497 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 KDELR1P24390 212 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 ADSLP30566 484 aaPredicted RBP9.06□□□□□ -0.96
VCL-206ENST00000623461 ZNF34Q8IZ26 560 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 FNDC5Q8NAU1 212 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 CISHQ9NSE2 258 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 SFMBT1Q9UHJ3 866 aa9.06□□□□□ -0.96
VCL-206ENST00000623461 DCDC2CA8MYV0 355 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 M0QYT0 321 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 GLP2RO95838 553 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 CHI3L1P36222 383 aaPredicted RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 HPCAP84074 193 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 ITGA7Q13683 1181 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 CHSY1Q86X52 802 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 LRRC49Q8IUZ0 686 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 PIK3C3Q8NEB9 887 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 EPS8L1Q8TE68 723 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 APOL5Q9BWW9 433 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 WDCPQ9H6R7 721 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 CXorf21Q9HAI6 301 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 ABT1Q9ULW3 272 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 A0A1W2PPM1 405 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 PDLIM1O00151 329 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 EIF4BP23588 611 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 INSCQ1MX18 579 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 EIF3MQ7L2H7 374 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 PGAM4Q8N0Y7 254 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 ZNF606Q8WXB4 792 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 TCRBV5S4A2TA0A5A2 114 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 ZMPSTE24O75844 475 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 NPTX2P47972 431 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 CDC16Q13042 620 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 LIPMQ5VYY2 423 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 ANKS6Q68DC2 871 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 PAGE2Q7Z2X7 111 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 MYO1HQ8N1T3 1032 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 MYLPFQ96A32 169 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 SPATA33Q96N06 139 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 TARS2Q9BW92 718 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 RERGLQ9H628 205 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 PREBQ9HCU5 417 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 TRMT13Q9NUP7 481 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 SYNPO2Q9UMS6 1093 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 PLLPQ9Y342 182 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 HAT1O14929 419 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 SLC2A4P14672 509 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 ACLYP53396 1101 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 KLF10Q13118 480 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 URGCPQ8TCY9 931 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 RAB2BQ8WUD1 216 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 STARD8Q92502 1023 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 LPAR1Q92633 364 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 PHF21BQ96EK2 531 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 Q96MT0 163 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 ERI2A8K979 691 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 STX11O75558 287 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 CNPP09543 421 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 PYDC2Q56P42 97 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 NEK5Q6P3R8 708 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 KLHDC10Q6PID8 442 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 HERC6Q8IVU3 1022 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 CACTIN-AS1Q8N1I8 211 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 TMEM176AQ96HP8 235 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 MORF4L1Q9UBU8 362 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 INVSQ9Y283 1065 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 RBMX2Q9Y388 322 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 AKAP12Q02952 1782 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 CASZ1Q86V15 1759 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 UGT2B11O75310 529 aa9.05□□□□□ -0.96
VCL-206ENST00000623461 PARNO95453 639 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 RPL22P35268 128 aaKnown RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 GNL1P36915 607 aaPredicted RBP9.05□□□□□ -0.96
VCL-206ENST00000623461 PAGE2BQ5JRK9 111 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms