RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 NOCTQ9UK39 431 aaKnown RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 HALP42357 657 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 PFKFB4Q16877 469 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 GLT6D1Q7Z4J2 308 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 DEFB128Q7Z7B8 93 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 ECHDC2Q86YB7 292 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 FITM2Q8N6M3 262 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 LRCH4O75427 683 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 ALDH2P05091 517 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 ERCC2P18074 760 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 SKIV2L2P42285 1042 aaKnown RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 MAP3K10Q02779 954 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 TMCO5AQ8N6Q1 288 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 RNF145Q96MT1 663 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 SERPINB11Q96P15 392 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 ZNF670Q9BS34 389 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 PRKD2Q9BZL6 878 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 TRIM45Q9H8W5 580 aaPredicted RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 KDM4FA0A1W2PPD8 638 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 E7ENQ6 273 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 H7C4K7 107 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 SH3BGRLO75368 114 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 PPP4R4Q6NUP7 873 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 IRGCQ6NXR0 463 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 LPCAT2Q7L5N7 544 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 XYLT1Q86Y38 959 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 MMADHCQ9H3L0 296 aaPredicted RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 FMN2Q9NZ56 1722 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 PLSCR1O15162 318 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 PIRTP0C851 137 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 MAXP61244 160 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 SDHAF4Q5VUM1 108 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 ADAM2Q99965 735 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 PHACTR1Q9C0D0 580 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 CLCA2Q9UQC9 943 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 AKAP12Q02952 1782 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 PRR5-ARHGAP8B1AHC4 643 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 ZNF862O60290 1169 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 COX4I1P13073 169 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 GSSP48637 474 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 MRPS15P82914 257 aaKnown RBP16.41■□□□□ 0.22
GABRB3-215ENST00000622697 ARHGAP8P85298 464 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 PLPPR4Q7Z2D5 763 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 PATL1Q86TB9 770 aaKnown RBP16.41■□□□□ 0.22
GABRB3-215ENST00000622697 CPT1BQ92523 772 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 SIKE1Q9BRV8 207 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 MTG1Q9BT17 334 aaPredicted RBP16.41■□□□□ 0.22
GABRB3-215ENST00000622697 OSBPL7Q9BZF2 842 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 TUBGCP4Q9UGJ1 667 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 CACNA1FO60840 1977 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 SYNCRIPO60506 623 aaKnown RBP16.41■□□□□ 0.22
GABRB3-215ENST00000622697 YWHAQP27348 245 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 AXLP30530 894 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 CXCL17Q6UXB2 119 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 RAB42Q8N4Z0 105 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 METTL6Q8TCB7 284 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 GLMNQ92990 594 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 GRIP2Q9C0E4 1043 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 ELOVL4Q9GZR5 314 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 TAS2R13Q9NYV9 303 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 NDUFA13Q9P0J0 144 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 AP4S1Q9Y587 144 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 WDR47O94967 919 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 SERPINH1P50454 418 aaKnown RBP16.41■□□□□ 0.22
GABRB3-215ENST00000622697 NEDD8Q15843 81 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 LRRC15Q8TF66 581 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 ELOVL6Q9H5J4 265 aa16.41■□□□□ 0.22
GABRB3-215ENST00000622697 APOBEC3GQ9HC16 384 aaKnown RBP16.41■□□□□ 0.22
GABRB3-215ENST00000622697 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 CCNB1P14635 433 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 HNRNPLP14866 589 aaKnown RBP eCLIP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 POU1F1P28069 291 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ADSSP30520 456 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 LRPAP1P30533 357 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 PCID2Q5JVF3 399 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 CRELD2Q6UXH1 353 aaPredicted RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 YAF2Q8IY57 180 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ANKRD27Q96NW4 1050 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 FBXO44Q9H4M3 255 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 SNX15Q9NRS6 342 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 IMPAD1Q9NX62 359 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 GRHL1Q9NZI5 618 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ATP6AP2A0A1C7CYW4 349 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 CCDC154A6NI56 674 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ATP6AP2O75787 350 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 CDKN2BP42772 138 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 SMAD5Q99717 465 aaKnown RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ZNF839A8K0R7 811 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 GBE1Q04446 702 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 CDC16Q13042 620 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ANKS6Q68DC2 871 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 APLFQ8IW19 511 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms