RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SNX12Q9UMY4 172 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 TROVE2P10155 538 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 PXNP49023 591 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 GNA12Q03113 381 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 OTOAQ7RTW8 1153 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 LRRC8CQ8TDW0 803 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 CLEC4CQ8WTT0 213 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 CASD1Q96PB1 797 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 XAB2Q9HCS7 855 aaKnown RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 DMAC2Q9NW81 257 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 GDAP2Q9NXN4 497 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 CACNA2D2Q9NY47 1150 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 UTP6Q9NYH9 597 aaKnown RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 SAE1Q9UBE0 346 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 NEU2Q9Y3R4 380 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 ARHGAP10A1A4S6 786 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 FRMD3A2A2Y4 597 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 E9PAM4 449 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 PAPSS1O43252 624 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 VPS26AO75436 327 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 TMCC1O94876 653 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 VNN1O95497 513 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CCNB1P14635 433 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 IRS1P35568 1242 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 COPS2P61201 443 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 OCRLQ01968 901 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 PTK2BQ14289 1009 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 KLHL38Q2WGJ6 581 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SLC26A9Q7LBE3 791 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SIX5Q8N196 739 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SNX31Q8N9S9 440 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 OR10T2Q8NGX3 314 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 FGF13Q92913 245 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 C8orf48Q96LL4 319 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 PPP1R10Q96QC0 940 aaKnown RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 BTBD1Q9H0C5 482 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 LHX5Q9H2C1 402 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CRTAC1Q9NQ79 661 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SIK3Q9Y2K2 1263 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SNX10Q9Y5X0 201 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 TTC28Q96AY4 2481 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CLUHO75153 1309 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 FAM170BA6NMN3 283 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 PIRO00625 290 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 MAGEC1O60732 1142 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 PHF2O75151 1096 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SMIM24O75264 130 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 GLP2RO95838 553 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 DSG1Q02413 1049 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CREB5Q02930 508 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 FOXD4Q12950 439 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 ARHGAP17Q68EM7 881 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 TRIM68Q6AZZ1 485 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SYTL1Q8IYJ3 562 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SPPL3Q8TCT6 385 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 WFIKKN2Q8TEU8 576 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 UBE2Q2Q8WVN8 375 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CD101Q93033 1021 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 BPIFA1Q9NP55 256 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CASS4Q9NQ75 786 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 PHPT1Q9NRX4 125 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 ZDHHC7Q9NXF8 308 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SIX4Q9UIU6 781 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 COG5Q9UP83 839 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 FAM187AA6NFU0 413 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 SLC25A14O95258 325 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 MMP8P22894 467 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 ASPAP45381 313 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 CARSP49589 748 aaKnown RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 EPHB4P54760 987 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 GHRHRQ02643 423 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 MMRN1Q13201 1228 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 ZC3H14Q6PJT7 736 aaKnown RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 STRADAQ7RTN6 431 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 TAF8Q7Z7C8 310 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 FAM3CQ92520 227 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 TSPAN17Q96FV3 270 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 TPSD1Q9BZJ3 242 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 ASB8Q9H765 288 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 FCF1Q9Y324 198 aaKnown RBP9.26□□□□□ -0.93
HDAC9-229ENST00000622668 USP54Q70EL1 1684 aa9.26□□□□□ -0.93
HDAC9-229ENST00000622668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 LRIG2O94898 1065 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 RASGRP1O95267 797 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 KLF8O95600 359 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 HLA-EP13747 358 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 GRK3P35626 688 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ATP1A2P50993 1020 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 MMEL1Q495T6 779 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 MIIPQ5JXC2 388 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 UBXN11Q5T124 520 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ACBD5Q5T8D3 534 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 DET1Q7L5Y6 550 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 TAS1R3Q7RTX0 852 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 MRPL10Q7Z7H8 261 aaKnown RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 HID1Q8IV36 788 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ALLCQ8N6M5 410 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SPATA4Q8NEY3 305 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms