RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SLC44A5Q8NCS7 719 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 GLMPQ8WWB7 406 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 LRRC59Q96AG4 307 aaKnown RBP5.68□□□□□ -1.5
VPS29-212ENST00000621131 LTV1Q96GA3 475 aaPredicted RBP5.68□□□□□ -1.5
VPS29-212ENST00000621131 LYZL4Q96KX0 146 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 TBCBQ99426 244 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 NUDT22Q9BRQ3 303 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 CHMP4AQ9BY43 222 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 CDCP1Q9H5V8 836 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 MLXIPQ9HAP2 919 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 SMC4Q9NTJ3 1288 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 PCDHA12Q9UN75 941 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 MAN2B2Q9Y2E5 1009 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 LRP12Q9Y561 859 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 PXDNQ92626 1479 aa5.68□□□□□ -1.5
VPS29-212ENST00000621131 KDRP35968 1356 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 PLEKHG2Q9H7P9 1386 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 A0A0G2JK05 382 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 A0A1W2PPC1 479 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 F8W810 466 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 CTIFO43310 598 aaKnown RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 UGDHO60701 494 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 ATG13O75143 517 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 NDUFB8O95169 186 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 SLC3A2P08195 630 aaKnown RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 PECAM1P16284 738 aaPredicted RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 EGR1P18146 543 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 HTR6P50406 440 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 RARSP54136 660 aaKnown RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 ALDH1L2Q3SY69 923 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 COBLL1Q53SF7 1204 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 RHPN2Q8IUC4 686 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 GLIS1Q8NBF1 620 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 EXOC6Q8TAG9 804 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 ADAMTS15Q8TE58 950 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 ASB12Q8WXK4 309 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 FRAT1Q92837 279 aaPredicted RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 SLC25A28Q96A46 364 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 PIMREGQ9BSJ6 248 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 SARGQ9BW04 601 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 NAA15Q9BXJ9 866 aaKnown RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 METTL14Q9HCE5 456 aaKnown RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 RGL1Q9NZL6 768 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 AGO2Q9UKV8 859 aaKnown RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 COG5Q9UP83 839 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 FAM50BQ9Y247 325 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 TNS1Q9HBL0 1735 aaKnown RBP5.67□□□□□ -1.5
VPS29-212ENST00000621131 MAP3K5Q99683 1374 aa5.67□□□□□ -1.5
VPS29-212ENST00000621131 LRRC37A3O60309 1634 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 NCAPD2Q15021 1401 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 LMO7Q8WWI1 1683 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 CRYBG1Q9Y4K1 1723 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 FAM90A8PA6NJQ4 464 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 PRPF4O43172 522 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS29-212ENST00000621131 SMAD6O43541 496 aaKnown RBP5.66□□□□□ -1.5
VPS29-212ENST00000621131 PLIN1O60240 522 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 SGPL1O95470 568 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 FAM90A13PP0C7W8 464 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 FAM90A24PP0C7X0 464 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 GSTM5P46439 218 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 ARL13BQ3SXY8 428 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 PLEKHO1Q53GL0 409 aaPredicted RBP5.66□□□□□ -1.5
VPS29-212ENST00000621131 ARHGAP15Q53QZ3 475 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 C1orf141Q5JVX7 400 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 DAB2IPQ5VWQ8 1189 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 TTLL5Q6EMB2 1281 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 HIBCHQ6NVY1 386 aaPredicted RBP5.66□□□□□ -1.5
VPS29-212ENST00000621131 ZNF549Q6P9A3 640 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 ADGRF4Q8IZF3 695 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 GRAMD1AQ96CP6 724 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 NLRP4Q96MN2 994 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 ELOVL1Q9BW60 279 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 STARD7Q9NQZ5 370 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 DECR2Q9NUI1 292 aa5.66□□□□□ -1.5
VPS29-212ENST00000621131 SOS1Q07889 1333 aaPredicted RBP5.66□□□□□ -1.5
VPS29-212ENST00000621131 ABCA3Q99758 1704 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 PARP4Q9UKK3 1724 aaKnown RBP5.65□□□□□ -1.5
VPS29-212ENST00000621131 KIR2DS5A0A0G2JLQ3 304 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 KIR2DS3K7RE56 304 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 VIPP01282 170 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 RFPL3SP0C7P2 107 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 IDEP14735 1019 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 ALDH7A1P49419 539 aaKnown RBP5.65□□□□□ -1.5
VPS29-212ENST00000621131 MAPKAPK3Q16644 382 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 TWISTNBQ3B726 338 aaPredicted RBP5.65□□□□□ -1.5
VPS29-212ENST00000621131 ZNF474Q6S9Z5 364 aaPredicted RBP5.65□□□□□ -1.5
VPS29-212ENST00000621131 C16orf89Q6UX73 402 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 KAT2BQ92831 832 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 EIF2AQ9BY44 585 aaKnown RBP5.65□□□□□ -1.5
VPS29-212ENST00000621131 BABAM1Q9NWV8 329 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 B3GNT3Q9Y2A9 372 aa5.65□□□□□ -1.5
VPS29-212ENST00000621131 EMSYQ7Z589 1322 aa5.65□□□□□ -1.51
VPS29-212ENST00000621131 CPDO75976 1380 aa5.65□□□□□ -1.51
VPS29-212ENST00000621131 KIAA0232Q92628 1395 aa5.65□□□□□ -1.51
VPS29-212ENST00000621131 OVOS2A0A0G2JMS6 1433 aa5.65□□□□□ -1.51
VPS29-212ENST00000621131 RREB1Q92766 1687 aa5.64□□□□□ -1.51
VPS29-212ENST00000621131 TMEM272A0A1B0GTI8 110 aa5.64□□□□□ -1.51
VPS29-212ENST00000621131 AKR1A1P14550 325 aa5.64□□□□□ -1.51
VPS29-212ENST00000621131 SLC8A1P32418 973 aa5.64□□□□□ -1.51
VPS29-212ENST00000621131 TEFQ10587 303 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms