RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 HMCESQ96FZ2 354 aa13.99□□□□□ -0.17
NEK3-210ENST00000620675 SLC2A11Q9BYW1 496 aa13.99□□□□□ -0.17
NEK3-210ENST00000620675 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
NEK3-210ENST00000620675 MUC3BQ9H195 1237 aa13.99□□□□□ -0.17
NEK3-210ENST00000620675 LRRC19Q9H756 370 aa13.99□□□□□ -0.17
NEK3-210ENST00000620675 CATSPERBQ9H7T0 1116 aa13.99□□□□□ -0.17
NEK3-210ENST00000620675 C2orf42Q9NWW7 574 aa13.99□□□□□ -0.17
NEK3-210ENST00000620675 ZNF318Q5VUA4 2279 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 MIF4GDA9UHW6 222 aaKnown RBP13.98□□□□□ -0.17
NEK3-210ENST00000620675 WASH3PC4AMC7 463 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 FGF10O15520 208 aaPredicted RBP13.98□□□□□ -0.17
NEK3-210ENST00000620675 CHRNB1P11230 501 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 GRIA2P42262 883 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 GNA12Q03113 381 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 RPS6KA1Q15418 735 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 EGFLAMQ63HQ2 1017 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 MBLAC2Q68D91 279 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 LINGO4Q6UY18 593 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 SETD3Q86TU7 594 aaPredicted RBP13.98□□□□□ -0.17
NEK3-210ENST00000620675 RFX6Q8HWS3 928 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 MAP7D3Q8IWC1 876 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 RCOR2Q8IZ40 523 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 ARHGEF2Q92974 986 aaKnown RBP13.98□□□□□ -0.17
NEK3-210ENST00000620675 HAUS1Q96CS2 278 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 RPL10LQ96L21 214 aaKnown RBP13.98□□□□□ -0.17
NEK3-210ENST00000620675 SPON2Q9BUD6 331 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 CIPCQ9C0C6 399 aa13.98□□□□□ -0.17
NEK3-210ENST00000620675 KIAA1522Q9P206 1035 aaPredicted RBP13.98□□□□□ -0.17
NEK3-210ENST00000620675 RCOR3Q9P2K3 495 aaPredicted RBP13.98□□□□□ -0.17
NEK3-210ENST00000620675 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
NEK3-210ENST00000620675 FAM86C2PA6NEL3 165 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 FAM170BA6NMN3 283 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 RASA4BC9J798 803 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 STK25O00506 426 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 KCNK3O14649 394 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 RASA4O43374 803 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 MT-CO1P00395 513 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 APODP05090 189 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 DCNP07585 359 aaKnown RBP13.97□□□□□ -0.17
NEK3-210ENST00000620675 PECAM1P16284 738 aaPredicted RBP13.97□□□□□ -0.17
NEK3-210ENST00000620675 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
NEK3-210ENST00000620675 MAPKAPK2P49137 400 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 GAS6Q14393 721 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 NUMA1Q14980 2115 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 C2orf27AQ580R0 203 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 TFDP3Q5H9I0 405 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 AFMIDQ63HM1 303 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 C1orf228Q6PIY5 440 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 TMCO3Q6UWJ1 677 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 UMODL1-AS1Q8N2C9 162 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 ZNF366Q8N895 744 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 FAM118BQ9BPY3 351 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 VPS28Q9UK41 221 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 SDK1Q7Z5N4 2213 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 A0A0A0MRY4 1105 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 ILVBLA1L0T0 632 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 GOLGA6L9A6NEM1 432 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 TMEM221A6NGB7 291 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 M0R296 226 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 MAN2B1O00754 1011 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 CST8O60676 142 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 RAMP2O60895 175 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 RNF40O75150 1001 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 HTR7P34969 479 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 TIE1P35590 1138 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 KIR2DL1P43626 348 aaPredicted RBP13.97□□□□□ -0.17
NEK3-210ENST00000620675 AMPD2Q01433 879 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 POLD3Q15054 466 aaPredicted RBP13.97□□□□□ -0.17
NEK3-210ENST00000620675 PTPRNQ16849 979 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 ODF2Q5BJF6 829 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 C6orf118Q5T5N4 469 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 SLC9A4Q6AI14 798 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 CCDC105Q8IYK2 499 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 UBL4BQ8N7F7 174 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 MYO19Q96H55 970 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 MTG2Q9H4K7 406 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 C11orf16Q9NQ32 467 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 ELOVL2Q9NXB9 296 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 VPS51Q9UID3 782 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 SLCO3A1Q9UIG8 710 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 JRKLQ9Y4A0 524 aa13.97□□□□□ -0.17
NEK3-210ENST00000620675 FRYLO94915 3013 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.96□□□□□ -0.17
NEK3-210ENST00000620675 J3KR12 359 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 TNFRSF10AO00220 468 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 DFFAO00273 331 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 ZMPSTE24O75844 475 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 CD160O95971 181 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 WASP42768 502 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 PAPOLAP51003 745 aaKnown RBP13.96□□□□□ -0.17
NEK3-210ENST00000620675 ARF5P84085 180 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 GRSF1Q12849 480 aaKnown RBP eCLIP13.96□□□□□ -0.17
NEK3-210ENST00000620675 ADAT2Q7Z6V5 191 aaKnown RBP13.96□□□□□ -0.17
NEK3-210ENST00000620675 AHI1Q8N157 1196 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 PJA1Q8NG27 643 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.17
NEK3-210ENST00000620675 C16orf45Q96MC5 204 aaPredicted RBP13.96□□□□□ -0.17
NEK3-210ENST00000620675 OSBPL8Q9BZF1 889 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 LMAN1LQ9HAT1 526 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms