RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 GALNT2Q10471 571 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 MAPRE1Q15691 268 aaKnown RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 STRA8Q7Z7C7 330 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 PNPLA1Q8N8W4 532 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 URGCPQ8TCY9 931 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 HDAC11Q96DB2 347 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 SEPT5Q99719 369 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 LBHD1Q9BQE6 289 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 GPR62Q9BZJ7 368 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 UNKQ9C0B0 810 aaKnown RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 GMIPQ9P107 970 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 MYO16Q9Y6X6 1858 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 TNFRSF10BO14763 440 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 INHAP05111 366 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 NMBRP28336 390 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 AIF1P55008 147 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 MAXP61244 160 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 NOGQ13253 232 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 PDE1CQ14123 709 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 COLGALT2Q8IYK4 626 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 TNS4Q8IZW8 715 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 MOCOSQ96EN8 888 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 GBA3Q9H227 469 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 C20orf96Q9NUD7 363 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 RRN3Q9NYV6 651 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 DCTN3O75935 186 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 UPP2O95045 317 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 UNC5CO95185 931 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 SKIP12755 728 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 CST5P28325 142 aaPredicted RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 MAP2K2P36507 400 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 HTRA3P83110 453 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 ITKQ08881 620 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 NIPAL4Q0D2K0 466 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 SNCBQ16143 134 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 PSMD5Q16401 504 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 MGAT5BQ3V5L5 792 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 CIR1Q86X95 450 aaPredicted RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
CIITA-212ENST00000618207 ACVR1CQ8NER5 493 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 IRGQQ8WZA9 623 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 ATP2A3Q93084 1043 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 TEKT5Q96M29 485 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 IARS2Q9NSE4 1012 aaKnown RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 PTPRDP23468 1912 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 NCAM2O15394 837 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 SF3B1O75533 1304 aaKnown RBP eCLIP12.66□□□□□ -0.38
CIITA-212ENST00000618207 CPA2P48052 419 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 DEFB115Q30KQ5 88 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 ALYREFQ86V81 257 aaKnown RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 NLRC5Q86WI3 1866 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 SH3TC2Q8TF17 1288 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 UROC1Q96N76 676 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 LRRC40Q9H9A6 602 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 EIF2B3Q9NR50 452 aaKnown RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 HS3ST4Q9Y661 456 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 GSTA2P09210 222 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 CHRNA4P43681 627 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 HCAR3P49019 387 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 SERPINB9P50453 376 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 MTA1Q13330 715 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 ANKRD20A4Q4UJ75 823 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 FASTKD1Q53R41 847 aaKnown RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 STEAP4Q687X5 459 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 TRAF7Q6Q0C0 670 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 ARHGAP12Q8IWW6 846 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 SUGP1Q8IWZ8 645 aaKnown RBP12.66□□□□□ -0.38
CIITA-212ENST00000618207 DCLK2Q8N568 766 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 TTC16Q8NEE8 873 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 AGR3Q8TD06 166 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 MTBPQ96DY7 904 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 SCLYQ96I15 445 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 KLHL5Q96PQ7 755 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 KCNK13Q9HB14 408 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 TMEM216Q9P0N5 145 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 L3MBTL1Q9Y468 752 aa12.66□□□□□ -0.38
CIITA-212ENST00000618207 E9PAM4 449 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 ALDH1A2O94788 518 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 T-ENOLP0DO92 83 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 AVPR1AP37288 418 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 ITPRIPL1Q6GPH6 555 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
CIITA-212ENST00000618207 TMEM173Q86WV6 379 aaPredicted RBP12.65□□□□□ -0.38
CIITA-212ENST00000618207 CHSY1Q86X52 802 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 PLD6Q8N2A8 252 aaKnown RBP12.65□□□□□ -0.38
CIITA-212ENST00000618207 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 PABPC5Q96DU9 382 aaKnown RBP12.65□□□□□ -0.38
CIITA-212ENST00000618207 FICDQ9BVA6 458 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 RBM22Q9NW64 420 aaKnown RBP eCLIP12.65□□□□□ -0.38
CIITA-212ENST00000618207 CPSF2Q9P2I0 782 aaKnown RBP12.65□□□□□ -0.38
CIITA-212ENST00000618207 VWA8A3KMH1 1905 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 ZCWPW2A0A1B0GU75 182 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 C2CD2LO14523 706 aa12.65□□□□□ -0.38
CIITA-212ENST00000618207 ITM2AO43736 263 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms