RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ZNF621Q6ZSS3 439 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 TBCBQ99426 244 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 HMG20AQ9NP66 347 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ABCC13Q9NSE7 274 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ARL15Q9NXU5 204 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 PSMB9P28065 219 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM187BQ17R55 369 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RNF44Q7L0R7 432 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 SH3BP5LQ7L8J4 393 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF605Q86T29 641 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 LGI2Q8N0V4 545 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF671Q8TAW3 534 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 METTL6Q8TCB7 284 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 CERKQ8TCT0 537 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 HTR3CQ8WXA8 447 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 LRRC39Q96DD0 335 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 HGH1Q9BTY7 390 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 EPB41L4AQ9HCS5 686 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 SNX6Q9UNH7 406 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 SH3GLB1Q9Y371 365 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 C15orf38-AP3S2A0A0A6YYH1 394 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 TSPAN3O60637 253 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 HOXB8P17481 243 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ARPINQ7Z6K5 226 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 TINF2Q9BSI4 451 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ZDHHC6Q9H6R6 413 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC40A1Q9NP59 571 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 TMX2Q9Y320 296 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 OAZ1P54368 228 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 PTSQ03393 145 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 AHI1Q8N157 1196 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 SEPHS2Q99611 448 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 NOD2Q9HC29 1040 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 DNMT3LQ9UJW3 386 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 LTFP02788 710 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 STAT5AP42229 794 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 IRAK1P51617 712 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 DEFB107AQ8IZN7 70 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 CENPIQ92674 756 aaPredicted RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 PGLYRP2Q96PD5 576 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 LIMD1Q9UGP4 676 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 BTN3A1O00481 513 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 PRLRP16471 622 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 ADORA2AP29274 412 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 CASP4P49662 377 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 CDK7P50613 346 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 OASLQ15646 514 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 ZDHHC13Q8IUH4 622 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 ATL1Q8WXF7 558 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 C9orf16Q9BUW7 83 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 IL22Q9GZX6 179 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 COPG2Q9UBF2 871 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 CXCL11O14625 94 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 PROSCO94903 275 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 NAA20P61599 178 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 PGM5Q15124 567 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 LY6KQ17RY6 165 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 TIMM50Q3ZCQ8 353 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 RBM43Q6ZSC3 357 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 ADHFE1Q8IWW8 467 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 CATSPER2Q96P56 530 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 CDC42EP4Q9H3Q1 356 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 N6AMT1Q9Y5N5 214 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 INSRRP14616 1297 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 GSTM5P46439 218 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 MYBPC2Q14324 1141 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 PCBP1Q15365 356 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 CBWD6Q4V339 395 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF470Q6ECI4 717 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 MTDHQ86UE4 582 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 ZFP28Q8NHY6 868 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM228BP0C875 321 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 HTR1BP28222 390 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 HERVK_113P62684 666 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 KLHL12Q53G59 568 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 FLCNQ8NFG4 579 aa11.35□□□□□ -0.59
CCDC144B-208ENST00000618081 AP3D1O14617 1153 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 GCATO75600 419 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ATP5C1P36542 298 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 MAPK8P45983 427 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC15A2Q16348 729 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ZSWIM7Q19AV6 140 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 TTC23Q5W5X9 447 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 IL27RAQ6UWB1 636 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 REPS2Q8NFH8 660 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 VAT1Q99536 393 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 FAIM2Q9BWQ8 316 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 TTLL2Q9BWV7 592 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 REEP1Q9H902 201 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 USP17L7P0C7H9 530 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms