RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ZNF77Q15935 545 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 PREPLQ4J6C6 727 aaPredicted RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 EMBQ6PCB8 327 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 DDX42Q86XP3 938 aaKnown RBP eCLIP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 ALLCQ8N6M5 410 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 PABPC5Q96DU9 382 aaKnown RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 MSLNLQ96KJ4 702 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 CEP41Q9BYV8 373 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 DPH5Q9H2P9 285 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 TMEM248Q9NWD8 314 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 KCNN4O15554 427 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 TBL1XO60907 577 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 ITGAVP06756 1048 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 VAV1P15498 845 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 SERPINB6P35237 376 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 DHX34Q14147 1143 aaKnown RBP16.67■□□□□ 0.26
SNAP47-213ENST00000617596 RABGAP1LQ5R372 815 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 TAX1BP1Q86VP1 789 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 TDRD5Q8NAT2 981 aaKnown RBP16.67■□□□□ 0.26
SNAP47-213ENST00000617596 RSAD2Q8WXG1 361 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 TMA16Q96EY4 203 aaKnown RBP16.67■□□□□ 0.26
SNAP47-213ENST00000617596 ASB16Q96NS5 453 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 MYADMQ96S97 322 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 POMKQ9H5K3 350 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 EPB41L5Q9HCM4 733 aa16.67■□□□□ 0.26
SNAP47-213ENST00000617596 DRG1Q9Y295 367 aaKnown RBP16.67■□□□□ 0.26
SNAP47-213ENST00000617596 E2F8A0AVK6 867 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 WASH4PA8MWX3 477 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 ANKRD65E5RJM6 399 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 CALRP27797 417 aaKnown RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 C5orf22Q49AR2 442 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 WLSQ5T9L3 541 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 DDI1Q8WTU0 396 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 TFB1MQ8WVM0 346 aaKnown RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 HMCESQ96FZ2 354 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 CDX2Q99626 313 aaPredicted RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 DDX50Q9BQ39 737 aaKnown RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 FRMD8P1Q9BZ68 369 aaPredicted RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 USP29Q9HBJ7 922 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 CLEC4EQ9ULY5 219 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 NEU2Q9Y3R4 380 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 NUP205Q92621 2012 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 A0A0D9SEW6 157 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 SOBPA7XYQ1 873 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 KCNK1O00180 336 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 GFRA2O00451 464 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 LATS1O95835 1130 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 KRT14P02533 472 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 GBP2P32456 591 aaPredicted RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 PAPOLAP51003 745 aaKnown RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 GNGT1P63211 74 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 USP4Q13107 963 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 PDK1Q15118 436 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 GLE1Q53GS7 698 aaKnown RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 SLC45A4Q5BKX6 768 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 ACBD5Q5T8D3 534 aaPredicted RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 TRIM68Q6AZZ1 485 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 TMEM25Q86YD3 366 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 GSPT2Q8IYD1 628 aaKnown RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 CARNMT1Q8N4J0 409 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 OTUD6BQ8N6M0 293 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 CELF5Q8N6W0 485 aaKnown RBP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 GIMAP7Q8NHV1 300 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 WFDC5Q8TCV5 224 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 SMARCD2Q92925 531 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 CAVIN3Q969G5 261 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 ZFYVE19Q96K21 471 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 QKIQ96PU8 341 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNAP47-213ENST00000617596 PRDM16Q9HAZ2 1276 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 MCM8Q9UJA3 840 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 CDH7Q9ULB5 785 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 SNX24Q9Y343 169 aa16.66■□□□□ 0.26
SNAP47-213ENST00000617596 GAS8O95995 478 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 ACVRL1P37023 503 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 GARSP41250 739 aaKnown RBP16.65■□□□□ 0.26
SNAP47-213ENST00000617596 CDH4P55283 916 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 GALNT2Q10471 571 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 COL19A1Q14993 1142 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 SKIV2LQ15477 1246 aaKnown RBP16.65■□□□□ 0.26
SNAP47-213ENST00000617596 FSCBQ5H9T9 825 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 FBXW10Q5XX13 1052 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 TANGO2Q6ICL3 276 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 BZW1Q7L1Q6 419 aaKnown RBP16.65■□□□□ 0.26
SNAP47-213ENST00000617596 ZNF354CQ86Y25 554 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 FAM217AQ8IXS0 508 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 UMODL1-AS1Q8N2C9 162 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 SMRP1Q8NCR6 262 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 GRK7Q8WTQ7 553 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 IFT81Q8WYA0 676 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 SLCO2A1Q92959 643 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 ERP44Q9BS26 406 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 ASIC3Q9UHC3 531 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 ZMYM5Q9UJ78 669 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 ZNF510Q9Y2H8 683 aa16.65■□□□□ 0.26
SNAP47-213ENST00000617596 BCLAF3A2AJT9 711 aaKnown RBP16.64■□□□□ 0.26
SNAP47-213ENST00000617596 RASA4BC9J798 803 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 F5H423 210 aaPredicted RBP16.64■□□□□ 0.26
SNAP47-213ENST00000617596 RASA4O43374 803 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms