RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LCA5Q86VQ0 697 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 IFNLR1Q8IU57 520 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 ARHGAP24Q8N264 748 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 NAT14Q8WUY8 206 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 PANX3Q96QZ0 392 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 WDCPQ9H6R7 721 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 ZNF358Q9NW07 568 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 HCSTQ9UBK5 93 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 SBF1O95248 1867 aa14.81□□□□□ -0.04
SHROOM1-208ENST00000617339 C9IYK1 514 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 TYROBPO43914 113 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 GJA9P57773 515 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 AP2B1P63010 937 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 DBN1Q16643 649 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 DDR2Q16832 855 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 EFHC1Q5JVL4 640 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 TFAP2DQ7Z6R9 452 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 MIB1Q86YT6 1006 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 GSTCDQ8NEC7 633 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 SLC26A7Q8TE54 656 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 MTBPQ96DY7 904 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 OXNAD1Q96HP4 312 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 SMOQ99835 787 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 MTMR10Q9NXD2 777 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 PGFP49763 221 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 NOGQ13253 232 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 STILQ15468 1287 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 PCSK7Q16549 785 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 DRICH1Q6PGQ1 229 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 ZNF467Q7Z7K2 595 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 MYLK4Q86YV6 388 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 TREML1Q86YW5 311 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 SENP6Q9GZR1 1112 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 ACSS3Q9H6R3 686 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 VRTNQ9H8Y1 702 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 CYLDQ9NQC7 956 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 TMLHEQ9NVH6 421 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 ATP6V1B1P15313 513 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 KCNA4P22459 653 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 GRIA2P42262 883 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 KLHL38Q2WGJ6 581 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 NCBP2-AS2Q69YL0 99 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 SPATA6LQ8N4H0 392 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 SMC1BQ8NDV3 1235 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 MYLPFQ96A32 169 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 SEPT5Q99719 369 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 CYP4F11Q9HBI6 524 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 MPP6Q9NZW5 540 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 STAP1Q9ULZ2 295 aa14.8□□□□□ -0.04
SHROOM1-208ENST00000617339 IQANK1A0A1B0GTG1 560 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 BNIP3LO60238 219 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 CAP1Q01518 475 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 TSPY1Q01534 308 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 PKDCCQ504Y2 493 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 SLC26A9Q7LBE3 791 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 UNC93AQ86WB7 457 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 NR1H4Q96RI1 486 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 SLC27A5Q9Y2P5 690 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 MBLAC1A4D2B0 266 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 GPR15P49685 360 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 LSAMPQ13449 338 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 MED21Q13503 144 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 GRAMD1BQ3KR37 738 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 CMC1Q7Z7K0 106 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 FAM35AQ86V20 835 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 POU5F2Q8N7G0 328 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 DEFB118Q96PH6 123 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 PSAT1Q9Y617 370 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 I6L893 689 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 ZSCAN9O15535 394 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 HNRNPCL1O60812 293 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 PDE5AO76074 875 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 SORBS2O94875 1100 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 HNRNPCP07910 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 DNAJB2P25686 324 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 GRK4P32298 578 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 SERPINB6P35237 376 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 TAF2Q6P1X5 1199 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 OTOP3Q7RTS5 596 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 CDKL3Q8IVW4 592 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 SPATA22Q8NHS9 363 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 DCAKDQ8WVC6 231 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 SRPK1Q96SB4 655 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 CAB39LQ9H9S4 337 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 OR12D3Q9UGF7 316 aa14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 RPL26L1Q9UNX3 145 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-208ENST00000617339 GOLGA8CPA6NN73 597 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 GPR182O15218 404 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 CA12O43570 354 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 DNAJC6O75061 913 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 TBX18O95935 607 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 GSTA3Q16772 222 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 PABPC1LQ4VXU2 614 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 SFT2D3Q587I9 215 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ALKAL1Q6UXT8 129 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ARHGAP36Q6ZRI8 547 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 LRRTM3Q86VH5 581 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ARID3BQ8IVW6 561 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ULK2Q8IYT8 1036 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 C5orf42Q9H799 3197 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms