RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PABPC5Q96DU9 382 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 HMCESQ96FZ2 354 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 OXNAD1Q96HP4 312 aaPredicted RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 ZNF778Q96MU6 729 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 MLPHQ9BV36 600 aaPredicted RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 FOXP3Q9BZS1 431 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 TRPC7Q9HCX4 862 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 GREB1Q4ZG55 1949 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 A0A0D9SEW6 157 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 FAM92AA1XBS5 289 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 NDUFAB1O14561 156 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 OPHN1O60890 802 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 STK10O94804 968 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 RTN3O95197 1032 aaPredicted RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 TOP3BO95985 862 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 APOEP02649 317 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 SLC6A4P31645 630 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 RPA3P35244 121 aaPredicted RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 MSH2P43246 934 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ABCG1P45844 678 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 SGSHP51688 502 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 PGGT1BP53609 377 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 RPL10AP62906 217 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 ITKQ08881 620 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 PCSK7Q16549 785 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 PARP6Q2NL67 630 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 MANEALQ5VSG8 457 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 PDZD4Q76G19 769 aaPredicted RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 RNF168Q8IYW5 571 aaPredicted RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 OR52K2Q8NGK3 314 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 DYDC1Q8WWB3 177 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ARNTL2Q8WYA1 636 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 PSMG2Q969U7 264 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ATXN7L3BQ96GX2 97 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 CCT8L2Q96SF2 557 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 RC3H2Q9HBD1 1191 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 PATJQ8NI35 1801 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 VCANP13611 3396 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 WDR91A4D1P6 747 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ZNF840PA6NDX5 716 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 FGF18O76093 207 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 KLKB1P03952 638 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ABHD2P08910 425 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 MYOGP15173 224 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 PHBP35232 272 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 SERPINB6P35237 376 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ACVRL1P37023 503 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ALDH1A3P47895 512 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 RPS24P62847 133 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 ZXDBP98169 803 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 DSG1Q02413 1049 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 TXNDC8Q6A555 127 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 TRABD2AQ86V40 505 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 CHSY1Q86X52 802 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 TMEM199Q8N511 208 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ARFGAP2Q8N6H7 521 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 KLHL23Q8NBE8 558 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 DCAKDQ8WVC6 231 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ATXN2LQ8WWM7 1075 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 HDAC11Q96DB2 347 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 THOC1Q96FV9 657 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 SPATA17Q96L03 361 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 TRABDQ9H4I3 376 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ACSS3Q9H6R3 686 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 SPG21Q9NZD8 308 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 PMPCBO75439 489 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 ABLIM3O94929 683 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 PARNO95453 639 aaKnown RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 IVLP07476 585 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 CNPP09543 421 aaKnown RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 CSH1P0DML2 217 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 CSH2P0DML3 217 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 HSPA1AP0DMV8 641 aaKnown RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 HSPA1BP0DMV9 641 aaKnown RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 ERVK-10P10266 1014 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 OR1E1P30953 314 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 ATP5C1P36542 298 aaKnown RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 SLC10A7Q0GE19 358 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 MROH9Q5TGP6 573 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 EMC10Q5UCC4 262 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 TAOK1Q7L7X3 1001 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 DNAJB7Q7Z6W7 309 aaPredicted RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 TADA2BQ86TJ2 420 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 NLRP14Q86W24 1093 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 RNF135Q8IUD6 432 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 LGI2Q8N0V4 545 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 IPMKQ8NFU5 416 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 MFSD3Q96ES6 412 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 MS4A3Q96HJ5 214 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 SERAC1Q96JX3 654 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 TEKT5Q96M29 485 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 FCRL3Q96P31 734 aaPredicted RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 EBNA1BP2Q99848 306 aaKnown RBP7.96□□□□□ -1.13
NEK3-207ENST00000617054 TRIM62Q9BVG3 475 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 EPN3Q9H201 632 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 CATSPERBQ9H7T0 1116 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 CHRAC1Q9NRG0 131 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 RBM22Q9NW64 420 aaKnown RBP eCLIP7.96□□□□□ -1.13
NEK3-207ENST00000617054 CLIC5Q9NZA1 410 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 IPO11Q9UI26 975 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms