RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SERAC1Q96JX3 654 aa21.39■■□□□ 1.01
TRAPPC3-208ENST00000616074 SPAG5Q96R06 1193 aa21.39■■□□□ 1.01
TRAPPC3-208ENST00000616074 KIAA1468Q9P260 1216 aa21.39■■□□□ 1.01
TRAPPC3-208ENST00000616074 VANGL2Q9ULK5 521 aa21.39■■□□□ 1.01
TRAPPC3-208ENST00000616074 HS3ST4Q9Y661 456 aa21.39■■□□□ 1.01
TRAPPC3-208ENST00000616074 DOCK9Q9BZ29 2069 aa21.39■■□□□ 1.01
TRAPPC3-208ENST00000616074 ATRXP46100 2492 aa21.39■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3DA0A087WVF3 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3IA0A087WXS9 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3EA0A087X179 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3KA0A087X1G2 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3FA6NER0 549 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3LB9A6J9 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 ERBB2P04626 1255 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3HP0C7X1 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 PON1P27169 355 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 OXCT1P55809 520 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 NME3Q13232 169 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 CAMK2BQ13554 666 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 SMAD1Q15797 465 aaKnown RBP21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 CAMK4Q16566 473 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3GQ6DHY5 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 OR6B2Q6IFH4 312 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3CQ6IPX1 549 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 DHRS13Q6UX07 377 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 C11orf57Q6ZUT1 292 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 IRF2BP1Q8IU81 584 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 TBC1D3Q8IZP1 549 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 SAP25Q8TEE9 199 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 SIX2Q9NPC8 291 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 GDF3Q9NR23 364 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 SLC25A13Q9UJS0 675 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 SARDHQ9UL12 918 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 RAXQ9Y2V3 346 aa21.38■■□□□ 1.01
TRAPPC3-208ENST00000616074 GTPBP10A4D1E9 387 aaKnown RBP21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 CBX4O00257 560 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 LATO43561 262 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 RTN2O75298 545 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 DAB1O75553 588 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 ITGAVP06756 1048 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 VASPP50552 380 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 NXPH1P58417 271 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 PTPN20Q4JDL3 420 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 C14orf80Q86SX3 495 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 OR8D1Q8WZ84 308 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 NOX5Q96PH1 765 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 FEM1AQ9BSK4 669 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 DKK4Q9UBT3 224 aa21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 TPX2Q9ULW0 747 aaKnown RBP21.37■■□□□ 1.01
TRAPPC3-208ENST00000616074 TRABD2BA6NFA1 517 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 TLR4O00206 839 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 ATP9BO43861 1147 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 PNMA6AP0CW24 399 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 EPHA8P29322 1005 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 SLC6A3Q01959 620 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 PTK2Q05397 1052 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 COL28A1Q2UY09 1125 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 ACCSLQ4AC99 568 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 OTUD1Q5VV17 481 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 NAPEPLDQ6IQ20 393 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 DSG4Q86SJ6 1040 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 PLCB1Q9NQ66 1216 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 ARHGAP20Q9P2F6 1191 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 VPS28Q9UK41 221 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 DNAJC12Q9UKB3 198 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 OR51B4Q9Y5P0 310 aa21.36■■□□□ 1.01
TRAPPC3-208ENST00000616074 BAHCC1Q9P281 2608 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 M0QYT0 321 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 ENC1O14682 589 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 YKT6O15498 198 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 SLC7A4O43246 635 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 PLRG1O43660 514 aaKnown RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 PAGE1O75459 146 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 MAT2AP31153 395 aaKnown RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 NOS2P35228 1153 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 CLCN1P35523 988 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 MTIF2P46199 727 aaKnown RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 CYP4F3Q08477 520 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 DNAJC3Q13217 504 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 ZNF177Q13360 481 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 COL9A2Q14055 689 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 DLG2Q15700 870 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 POM121L1PQ3SYA9 428 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 SLC45A4Q5BKX6 768 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 AGBL4Q5VU57 503 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 Q6ZVU0 165 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 SLC26A9Q7LBE3 791 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 SLC47A2Q86VL8 602 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 CNDP2Q96KP4 475 aaKnown RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 PPP1R9BQ96SB3 815 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 KDM4CQ9H3R0 1056 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 SYNCQ9H7C4 482 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 PIGVQ9NUD9 493 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 PPM1HQ9ULR3 514 aa21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 SMG1Q96Q15 3661 aaKnown RBP21.35■■□□□ 1.01
TRAPPC3-208ENST00000616074 FOXN3O00409 490 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 CLDN11O75508 207 aa21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 LDOC1O95751 146 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC3-208ENST00000616074 KRT9P35527 623 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms