RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MARC1Q5VT66 337 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 SYT12Q8IV01 421 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 PRDM16Q9HAZ2 1276 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 RABGEF1Q9UJ41 708 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 A0A1W2PQ72 361 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 G3V2T6 193 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 ERVK-21P61565 698 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 FAM129CQ86XR2 697 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 UBE2J2Q8N2K1 259 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 TMEM125Q96AQ2 219 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 PSMC3IPQ9P2W1 217 aaPredicted RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 RWDD3Q9Y3V2 267 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 PDE9AO76083 593 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 CCKBRP32239 447 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 PPP2R2DQ66LE6 453 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 H0YGN5 161 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 OR5F1O95221 314 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 DPEP1P16444 411 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 ZNF527Q8NB42 609 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 RGS17Q9UGC6 210 aaPredicted RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 GRIN2DO15399 1336 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 CPED1A4D0V7 1026 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 EFCAB10A6NFE3 127 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 SEC31AO94979 1220 aaKnown RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 CRATP43155 626 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 USP4Q13107 963 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 AMZ1Q400G9 498 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 DHX40Q8IX18 779 aaKnown RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 LNX2Q8N448 690 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 HCN4Q9Y3Q4 1203 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 NEU2Q9Y3R4 380 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 NPHP4O75161 1426 aaPredicted RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 DDX3YO15523 660 aaKnown RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 CXCL14O95715 111 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 IL33O95760 270 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 ZNF286BP0CG31 522 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 PSMB9P28065 219 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 SYDE1Q6ZW31 735 aaPredicted RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 MNTQ99583 582 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 GGA2Q9UJY4 613 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 PDHXO00330 501 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 NKRFO15226 690 aaKnown RBP eCLIP12.84□□□□□ -0.35
TCF4-248ENST00000616053 CCT3P49368 545 aaKnown RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 MC1RQ01726 317 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 MAPK14Q16539 360 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 MZT2AQ6P582 158 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 CD302Q8IX05 232 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 SEC16BQ96JE7 1060 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 AIF1LQ9BQI0 150 aa12.84□□□□□ -0.35
TCF4-248ENST00000616053 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 PDGFDQ9GZP0 370 aaPredicted RBP12.84□□□□□ -0.35
TCF4-248ENST00000616053 TPBGLP0DKB5 382 aa12.83□□□□□ -0.35
TCF4-248ENST00000616053 IL12RB1P42701 662 aa12.83□□□□□ -0.35
TCF4-248ENST00000616053 PPP2R2BQ00005 443 aa12.83□□□□□ -0.35
TCF4-248ENST00000616053 BNIP1Q12981 228 aa12.83□□□□□ -0.35
TCF4-248ENST00000616053 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.35
TCF4-248ENST00000616053 RUSC2Q8N2Y8 1516 aa12.83□□□□□ -0.35
TCF4-248ENST00000616053 PSIP1O75475 530 aaKnown RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 SPAG6O75602 509 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 TRAPPC6AO75865 159 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 GRIK4Q16099 956 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CRY1Q16526 586 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 GXYLT1Q4G148 440 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 GALNT18Q6P9A2 607 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 RTL4Q6ZR62 310 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 TOP1MTQ969P6 601 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 SLC38A2Q96QD8 506 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 C6orf62Q9GZU0 229 aaPredicted RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 IMP3Q9NV31 184 aaKnown RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 TCHHQ07283 1943 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 SSNA1O43805 119 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CSH1P0DML2 217 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CSH2P0DML3 217 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 NMT1P30419 496 aaKnown RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 MTM1Q13496 603 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 RUNX2Q13950 521 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CERCAMQ5T4B2 595 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 SHDQ96IW2 340 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 GAL3ST4Q96RP7 486 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 TRIM66O15016 1216 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 ATP8B1O43520 1251 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 KCNH1O95259 989 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 EYA4O95677 639 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CDH3P22223 829 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 MAD2L1BPQ15013 274 aaPredicted RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 SLC2A7Q6PXP3 512 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms