RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MLPHQ9BV36 600 aaPredicted RBP19.56■□□□□ 0.72
MMP28-204ENST00000615136 TSSK1BQ9BXA7 367 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 SEZ6LQ9BYH1 1024 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 EIF2B3Q9NR50 452 aaKnown RBP19.56■□□□□ 0.72
MMP28-204ENST00000615136 IL37Q9NZH6 218 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 MPP6Q9NZW5 540 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 PCDHA11Q9Y5I1 949 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 GREB1Q4ZG55 1949 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 FAM159BA6NKW6 160 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 OR6C75A6NL08 312 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 NCAM2O15394 837 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 TLE2Q04725 743 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 PPP2R5DQ14738 602 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 MGAT5BQ3V5L5 792 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 RASIP1Q5U651 963 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 PIK3R6Q5UE93 754 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 SLC39A5Q6ZMH5 540 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.56■□□□□ 0.72
MMP28-204ENST00000615136 USP33Q8TEY7 942 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 STAMBPL1Q96FJ0 436 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 OXNAD1Q96HP4 312 aaPredicted RBP19.56■□□□□ 0.72
MMP28-204ENST00000615136 RAB3IPQ96QF0 476 aaPredicted RBP19.56■□□□□ 0.72
MMP28-204ENST00000615136 SYBUQ9NX95 663 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 MICAL3Q7RTP6 2002 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 DFFAO00273 331 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 COPEO14579 308 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 KLF11O14901 512 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 TGDSO95455 350 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 MLNP12872 115 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 NFKB1P19838 968 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 TARSP26639 723 aaKnown RBP19.55■□□□□ 0.72
MMP28-204ENST00000615136 HOXC13P31276 330 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 SERPINB6P35237 376 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 ZNF135P52742 658 aaPredicted RBP19.55■□□□□ 0.72
MMP28-204ENST00000615136 CDK16Q00536 496 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 DUSP4Q13115 394 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 GPR17Q13304 367 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 LGSNQ5TDP6 509 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 CASC4Q6P4E1 433 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 CNTD1Q8N815 330 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 OR52K1Q8NGK4 314 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 MTBPQ96DY7 904 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 SLC39A13Q96H72 371 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 TMEM237Q96Q45 408 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 SRPK1Q96SB4 655 aaKnown RBP19.55■□□□□ 0.72
MMP28-204ENST00000615136 FERMT1Q9BQL6 677 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 VN1R3Q9BXE9 311 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 FBXO44Q9H4M3 255 aa19.55■□□□□ 0.72
MMP28-204ENST00000615136 NYNRINQ9P2P1 1898 aaKnown RBP19.55■□□□□ 0.72
MMP28-204ENST00000615136 FAM92AA1XBS5 289 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 JCHAINP01591 159 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 T-ENOLP0DO92 83 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 RPL17P18621 184 aaKnown RBP19.54■□□□□ 0.72
MMP28-204ENST00000615136 MX2P20592 715 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 SERPINB4P48594 390 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 EFEMP1Q12805 493 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 TEX44Q53QW1 395 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 MSANTD2Q6P1R3 559 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 CES3Q6UWW8 571 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 ANKRD33Q7Z3H0 272 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 TMCO2Q7Z6W1 182 aaPredicted RBP19.54■□□□□ 0.72
MMP28-204ENST00000615136 RFWD2Q8NHY2 731 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 DIS3LQ8TF46 1054 aaKnown RBP19.54■□□□□ 0.72
MMP28-204ENST00000615136 UTP4Q969X6 686 aaKnown RBP19.54■□□□□ 0.72
MMP28-204ENST00000615136 SERPINB11Q96P15 392 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 TRIM55Q9BYV6 548 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 SLC39A8Q9C0K1 460 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 UBP1Q9NZI7 540 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 IL1RAPL1Q9NZN1 696 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 SDR42E2A6NKP2 422 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 E9PAM4 449 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 RFPL1O75677 317 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 TUBP50607 506 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 SARNPP82979 210 aaKnown RBP19.54■□□□□ 0.72
MMP28-204ENST00000615136 TAF10Q12962 218 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 BMPR2Q13873 1038 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 KCTD11Q693B1 232 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 CDHR3Q6ZTQ4 885 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 CYS1Q717R9 158 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 GIPC2Q8TF65 315 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 FBXO32Q969P5 355 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 TTC17Q96AE7 1141 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 TBC1D31Q96DN5 1066 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 APOL2Q9BQE5 337 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 GBA3Q9H227 469 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 MOCS1Q9NZB8 636 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 ZFP69BQ9UJL9 534 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 CDY1Q9Y6F8 540 aa19.54■□□□□ 0.72
MMP28-204ENST00000615136 HMX2A2RU54 273 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 TRAFD1O14545 582 aaPredicted RBP19.53■□□□□ 0.72
MMP28-204ENST00000615136 KRT38O76015 456 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 YWHAQP27348 245 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 OVGP1Q12889 678 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 STEAP4Q687X5 459 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 OTOP3Q7RTS5 596 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 AGAP11Q8TF27 550 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 SLC7A6OSQ96CW6 309 aaPredicted RBP19.53■□□□□ 0.72
MMP28-204ENST00000615136 TEKT5Q96M29 485 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 ALG13Q9NP73 1137 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms