RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 CSPG4P5Q96PW8 444 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 ZNF670Q9BS34 389 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 SPON2Q9BUD6 331 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 ATP13A1Q9HD20 1204 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 POLMQ9NP87 494 aaPredicted RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 CACNA2D2Q9NY47 1150 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 CWC15Q9P013 229 aaKnown RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 ZNF212Q9UDV6 495 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 FBXO4Q9UKT5 387 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 INTS6Q9UL03 887 aaKnown RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 A0A0D9SEW6 157 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 SGK1O00141 431 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 CBX4O00257 560 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 SYNCRIPO60506 623 aaKnown RBP13.59□□□□□ -0.23
MDC1-209ENST00000613547 ALDH1A2O94788 518 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 PAPSS2O95340 614 aaPredicted RBP13.59□□□□□ -0.23
MDC1-209ENST00000613547 SERPINB6P35237 376 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 WASP42768 502 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 NDST2P52849 883 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
MDC1-209ENST00000613547 SATB1Q01826 763 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 CRY1Q16526 586 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 ARTNQ5T4W7 220 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 RETSATQ6NUM9 610 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 PKN3Q6P5Z2 889 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 TMCO3Q6UWJ1 677 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 UMODL1-AS1Q8N2C9 162 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 CAMKK1Q8N5S9 505 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 TSTD1Q8NFU3 115 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 OR7D4Q8NG98 312 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 OR52K2Q8NGK3 314 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 FAM71BQ8TC56 605 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 ALG14Q96F25 216 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 ACOX2Q99424 681 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 GABRG3Q99928 467 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 KCNH6Q9H252 994 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 ZDHHC4Q9NPG8 344 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 KLHL11Q9NVR0 708 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 SALL4Q9UJQ4 1053 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 GUCA1BQ9UMX6 200 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 ERVW-1Q9UQF0 538 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 HCN4Q9Y3Q4 1203 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 HYOU1Q9Y4L1 999 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 OR51B4Q9Y5P0 310 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 KIAA1549LQ6ZVL6 1849 aa13.59□□□□□ -0.23
MDC1-209ENST00000613547 ZSCAN12O43309 604 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 EPHX1P07099 455 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 IL12RB1P42701 662 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 NRLP54845 237 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 CSTF1Q05048 431 aaKnown RBP13.58□□□□□ -0.24
MDC1-209ENST00000613547 SLC20A2Q08357 652 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 DPYSQ14117 519 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 DPYSL3Q14195 570 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 ANGPT1Q15389 498 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 PTPRNQ16849 979 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 ATP13A4Q4VNC1 1196 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 ZNF662Q6ZS27 426 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 VSIG1Q86XK7 387 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
MDC1-209ENST00000613547 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 ARHGEF2Q92974 986 aaKnown RBP13.58□□□□□ -0.24
MDC1-209ENST00000613547 ALS2CR12Q96Q35 445 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 FAM126AQ9BYI3 521 aaPredicted RBP13.58□□□□□ -0.24
MDC1-209ENST00000613547 GOLPH3Q9H4A6 298 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
MDC1-209ENST00000613547 NDFIP2Q9NV92 336 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 TRIM10Q9UDY6 481 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 SUN2Q9UH99 717 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 VPS51Q9UID3 782 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 PPP2R2CQ9Y2T4 447 aa13.58□□□□□ -0.24
MDC1-209ENST00000613547 CXorf51AA0A1B0GTR3 108 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 ZSCAN5CA6NGD5 496 aaPredicted RBP13.57□□□□□ -0.24
MDC1-209ENST00000613547 ARHGAP42A6NI28 874 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 ZNF487B1APH4 448 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 RASA4BC9J798 803 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 RASA4O43374 803 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 ADAM23O75077 832 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 PALMO75781 387 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 APBB3O95704 486 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
MDC1-209ENST00000613547 AMPD1P23109 780 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 KDELR1P24390 212 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 CETN2P41208 172 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 CTSOP43234 321 aaPredicted RBP13.57□□□□□ -0.24
MDC1-209ENST00000613547 NUMBP49757 651 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
MDC1-209ENST00000613547 CLCN6P51797 869 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 ENPP2Q13822 863 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 ZNF528Q3MIS6 628 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 ACCSLQ4AC99 568 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 PEX26Q7Z412 305 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 KATNAL2Q8IYT4 538 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 TSC1Q92574 1164 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 RBM41Q96IZ5 413 aaKnown RBP13.57□□□□□ -0.24
MDC1-209ENST00000613547 MRGPRX3Q96LB0 322 aa13.57□□□□□ -0.24
MDC1-209ENST00000613547 PSMB7Q99436 277 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms