RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MREGQ8N565 214 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 NKAPQ8N5F7 415 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 REPS2Q8NFH8 660 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 DCUN1D5Q9BTE7 237 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 THG1LQ9NWX6 298 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 SEC22BO75396 215 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 IL6P05231 212 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 PBLDP30039 288 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 S100A3P33764 101 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 DPYSL3Q14195 570 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 MFSD7Q6UXD7 560 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 SPATC1LQ9H0A9 340 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 CORO2BQ9UQ03 480 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 MAPK8P45983 427 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 STARD3Q14849 445 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 KAT2BQ92831 832 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 SMAD5Q99717 465 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 LIMD1Q9UGP4 676 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 POLLQ9UGP5 575 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 TCRBV5S4A2TA0A5A2 114 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 RPL3P39023 403 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 INO80DQ53TQ3 878 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 RNF43Q68DV7 783 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 FOXR2Q6PJQ5 311 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 TMC7Q7Z402 723 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 CAMK1DQ8IU85 385 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 DUSP9Q99956 384 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 SH3BP4Q9P0V3 963 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 TRIM43BA6NCK2 446 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 SLITRK3O94933 977 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 TGFB2P61812 414 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 PCID2Q5JVF3 399 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 GLT6D1Q7Z4J2 308 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 RDH11Q8TC12 318 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 FNIP1Q8TF40 1166 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 PRCCQ92733 491 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 ANAPC2Q9UJX6 822 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 LRRC10BA6NIK2 292 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 OR1E1P30953 314 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 TUFMP49411 452 aaKnown RBP17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 SQLEQ14534 574 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 CRELD2Q6UXH1 353 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 ARCQ7LC44 396 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 NKX2-3Q8TAU0 364 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 PROX1Q92786 737 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 SNTG2Q9NY99 539 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 NFASCO94856 1347 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 LBPP18428 481 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 PLCL1Q15111 1095 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 SNX32Q86XE0 403 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 CACTIN-AS1Q8N1I8 211 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 CKAP2Q8WWK9 683 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 FAM210AQ96ND0 272 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 C1QTNF7Q9BXJ2 289 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 FAM126AQ9BYI3 521 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 POLR1EQ9GZS1 481 aaKnown RBP17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 POMKQ9H5K3 350 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 OPTCQ9UBM4 332 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 PCYOX1Q9UHG3 505 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 NCANO14594 1321 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 EPN2O95208 641 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 KLRK1P26718 216 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 MZT2AQ6P582 158 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 C16orf62Q7Z3J2 963 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 TSPAN18Q96SJ8 248 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 RIBC2Q9H4K1 309 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 SNCAIPQ9Y6H5 919 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 KPNA5O15131 536 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 MFN2O95140 757 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 INSRRP14616 1297 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 CCNA2P20248 432 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 STAT5AP42229 794 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 MZT2BQ6NZ67 158 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 USP7Q93009 1102 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 PHF21BQ96EK2 531 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 UROC1Q96N76 676 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 MCM8Q9UJA3 840 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 CRYL1Q9Y2S2 319 aa17.69■□□□□ 0.42
HMGXB3-206ENST00000613459 KCNH1O95259 989 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 FAAP100Q0VG06 881 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 STX4Q12846 297 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 TTC23Q5W5X9 447 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 C8orf59Q8N0T1 100 aaPredicted RBP17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 UBASH3BQ8TF42 649 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 ATL1Q8WXF7 558 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 SLC39A8Q9C0K1 460 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 CAPN10Q9HC96 672 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 ABCC13Q9NSE7 274 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 TFRCP02786 760 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 CYP1A2P05177 515 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 TSPAN19P0C672 248 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 MAPK11Q15759 364 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 OTUD3Q5T2D3 398 aaPredicted RBP17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 RNF145Q96MT1 663 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 RNPEPL1Q9HAU8 725 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 SALL3Q9BXA9 1300 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 ZBTB14O43829 449 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 MIPP30301 263 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms