RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 IKZF3Q9UKT9 509 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 IGSF1Q8N6C5 1336 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A9O60656 530 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 VAPBO95292 243 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A6P19224 532 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A1P22309 533 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A4P22310 534 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A3P35503 534 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A5P35504 534 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 FAPQ12884 760 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 DGCR6Q14129 220 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ZBTB6Q15916 424 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 NRF1Q16656 503 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 RNF219Q5W0B1 726 aaPredicted RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 DUS1LQ6P1R4 473 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 PLCZ1Q86YW0 608 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 FAM47BQ8NA70 645 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ZNF540Q8NDQ6 660 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 MAGEE2Q8TD90 523 aaPredicted RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 AKAP1Q92667 903 aaKnown RBP eCLIP8.91□□□□□ -0.98
TTC28-208ENST00000612946 RANBP3Q9H6Z4 567 aaPredicted RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A7Q9HAW7 530 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A10Q9HAW8 530 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 UGT1A8Q9HAW9 530 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 LATS2Q9NRM7 1088 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 AKT3Q9Y243 479 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 FEN1P39748 380 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 ECT2LQ008S8 904 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 GALNT3Q14435 633 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 CDYL2Q8N8U2 506 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 HTRA1Q92743 480 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 NIF3L1Q9GZT8 377 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 CATSPERZQ9NTU4 200 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 AGO2Q9UKV8 859 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 KHDRBS3O75525 346 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 IL32P24001 234 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 ALDH1B1P30837 517 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 DSTYKQ6XUX3 929 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 FAM220AQ7Z4H9 259 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 PGAM4Q8N0Y7 254 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 LXNQ9BS40 222 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 PROSCO94903 275 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 RAB5BP61020 215 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 TGM3Q08188 693 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CCDC107Q8WV48 283 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 KBTBD7Q8WVZ9 684 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 IRGQQ8WZA9 623 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 FIG4Q92562 907 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 KDM6BO15054 1643 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 RBM47A0AV96 593 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 PLOD3O60568 738 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CNPP09543 421 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 RTP1P59025 263 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 LRRC74AQ0VAA2 488 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 SYTL3Q4VX76 610 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 SLC25A24Q6NUK1 477 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CHSY1Q86X52 802 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CDK20Q8IZL9 346 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 ROPN1LQ96C74 230 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 NXNL1Q96CM4 212 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 SPATA5L1Q9BVQ7 753 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CD93Q9NPY3 652 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 WWOXQ9NZC7 414 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 PI4KBQ9UBF8 816 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 PCDHA3Q9Y5H8 950 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 KPNA6O60684 536 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 DGAT1O75907 488 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 HMBSP08397 361 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 HNRNPH3P31942 346 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 GPALPP1Q8IXQ4 340 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 FAM126BQ8IXS8 530 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 OR56A4Q8NGH8 313 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 MRPL57Q9BQC6 102 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 LACRTQ9GZZ8 138 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 RAD18Q9NS91 495 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 GINS2Q9Y248 185 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 ABCA6Q8N139 1617 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 ERVV-1B6SEH8 477 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CHRNGP07510 517 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 SRP54P61011 504 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 AIFM3Q96NN9 605 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 AIFM2Q9BRQ8 373 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 AHSPQ9NZD4 102 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 AGAP1Q9UPQ3 857 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.9□□□□□ -0.98
TTC28-208ENST00000612946 METP08581 1390 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 ALAS1P13196 640 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 RPL21P46778 160 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 NCOA4Q13772 614 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CIAPIN1Q6FI81 312 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 ARMC8Q8IUR7 673 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 TSEN2Q8NCE0 465 aaKnown RBP8.9□□□□□ -0.98
TTC28-208ENST00000612946 ANKRD49Q8WVL7 239 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 CLPTM1LQ96KA5 538 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 PFDN5Q99471 154 aa8.9□□□□□ -0.98
TTC28-208ENST00000612946 UQCC2Q9BRT2 126 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms