RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 DDX56Q9NY93 547 aaKnown RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 OR12D3Q9UGF7 316 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 MAGEB3O15480 346 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 CLPTM1O96005 669 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 TYK2P29597 1187 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 GLUD2P49448 558 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 WNT7BP56706 349 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 RHOAP61586 193 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 FMO1Q01740 532 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ARHGEF7Q14155 803 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 C16orf72Q14CZ0 275 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 RNF43Q68DV7 783 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SCARA3Q6AZY7 606 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SLC39A4Q6P5W5 647 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 NUDT18Q6ZVK8 323 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 CDKL3Q8IVW4 592 aaPredicted RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ZNF366Q8N895 744 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 PRELID2Q8N945 189 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 EMID1Q96A84 441 aaPredicted RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SH3KBP1Q96B97 665 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SNF8Q96H20 258 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 VPS39Q96JC1 886 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ZSWIM1Q9BR11 485 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 CINPQ9BW66 212 aaPredicted RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 TSSK1BQ9BXA7 367 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 OLA1Q9NTK5 396 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ARL8BQ9NVJ2 186 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 UTP6Q9NYH9 597 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 PACSIN3Q9UKS6 424 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 MEI4A8MW99 385 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 GPC4O75487 556 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ETS1P14921 441 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 NCF2P19878 526 aaPredicted RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 RBM44Q6ZP01 1051 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 LRRC6Q86X45 466 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ARL14EPQ8N8R7 260 aaPredicted RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 CATSPER2Q96P56 530 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 MFSD1Q9H3U5 465 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 NRXN2Q9P2S2 1712 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SLC25A13Q9UJS0 675 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 TMA7Q9Y2S6 64 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 KAT6AQ92794 2004 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SYNDIG1LA6NDD5 238 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 GPR15P49685 360 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 PPIDQ08752 370 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 FASTKD1Q53R41 847 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 RARS2Q5T160 578 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 UTS2BQ765I0 119 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SHC3Q92529 594 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 USP6NLQ92738 828 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 KLHL5Q96PQ7 755 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 YIPF2Q9BWQ6 316 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SMG9Q9H0W8 520 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 FZD8Q9H461 694 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 OSGEPL1Q9H4B0 414 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 CATSPERBQ9H7T0 1116 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 GMIPQ9P107 970 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 ZC3H7BQ9UGR2 993 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
FAM3A-221ENST00000612856 SPTAN1Q13813 2472 aaKnown RBP11.07□□□□□ -0.64
FAM3A-221ENST00000612856 A0A1W2PRU2 124 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 SMAPO00193 183 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 LZTS3O60299 673 aaPredicted RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 PROSCO94903 275 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 LCA5LO95447 670 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 MYL2P10916 166 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 JAM2P57087 298 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 CYP4F8P98187 520 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 SLC6A3Q01959 620 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 TAP1Q03518 808 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 LPIN1Q14693 890 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 PARP6Q2NL67 630 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 LPCAT4Q643R3 524 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 VSTM1Q6UX27 236 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 NDUFAF2Q8N183 169 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 EIF1ADQ8N9N8 165 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 TBCBQ99426 244 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 CADM1Q9BY67 442 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 KIAA1257Q9ULG3 409 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 NEU2Q9Y3R4 380 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 SLC30A1Q9Y6M5 507 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 GTPBP10A4D1E9 387 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 LSM1O15116 133 aaKnown RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 RAMP2O60895 175 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 XYLBO75191 536 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 ADRA1DP25100 572 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 SLC1A1P43005 524 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 MAGEA4P43358 317 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 MGAT5Q09328 741 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 PTK7Q13308 1070 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 SH3PXD2AQ5TCZ1 1133 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 MROH9Q5TGP6 573 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 FBXO46Q6PJ61 603 aaPredicted RBP11.06□□□□□ -0.64
FAM3A-221ENST00000612856 LINGO4Q6UY18 593 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 ZNF677Q86XU0 584 aa11.06□□□□□ -0.64
FAM3A-221ENST00000612856 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms