RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 GREM1O60565 184 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 LATS1O95835 1130 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 CKMP06732 381 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 MYZAPP0CAP1 466 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 CCNB1P14635 433 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 OR1E1P30953 314 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 HOXA9P31269 272 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 CD68P34810 354 aaPredicted RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 LMAN1P49257 510 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 IFI35P80217 286 aaPredicted RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 SLC7A9P82251 487 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 CBLBQ13191 982 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 MTM1Q13496 603 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 RABGAP1LQ5R372 815 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 COL13A1Q5TAT6 717 aaPredicted RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 TIGD7Q6NT04 549 aaPredicted RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 CAND1Q86VP6 1230 aaKnown RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 ANKMY2Q8IV38 441 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 HMCESQ96FZ2 354 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 DDX50Q9BQ39 737 aaKnown RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 WDR83Q9BRX9 315 aaKnown RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 PBX4Q9BYU1 374 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 GBA3Q9H227 469 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 RETREG1Q9H6L5 497 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 CERS4Q9HA82 394 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 LRRC4CQ9HCJ2 640 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 EIF2B3Q9NR50 452 aaKnown RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 NYNRINQ9P2P1 1898 aaKnown RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 ZFP37Q9Y6Q3 630 aaPredicted RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 ARHGAP42A6NI28 874 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 TRDMT1O14717 391 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 PER2O15055 1255 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 RAMP2O60895 175 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 AVILO75366 819 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 ABHD2P08910 425 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 GJA1P17302 382 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 PTPN2P17706 415 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 CCR2P41597 374 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 EPHA5P54756 1037 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 CDH4P55283 916 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 RPS24P62847 133 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 CBX1P83916 185 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 CDK16Q00536 496 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 POLD3Q15054 466 aaPredicted RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 KRT71Q3SY84 523 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 PARP15Q460N3 678 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 TTMPQ5BVD1 217 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 STXBP5Q5T5C0 1151 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 ZNF534Q76KX8 674 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 PYROXD1Q8WU10 500 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 PRICKLE1Q96MT3 831 aaPredicted RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 IL12RB2Q99665 862 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 RSPH14Q9UHP6 348 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 DOCK6Q96HP0 2047 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 FGF19O95750 216 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 HNRNPA1P09651 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 PFKLP17858 780 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 MAGEA3P43357 314 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 YBEYP58557 167 aaPredicted RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 SARNPP82979 210 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 Q6ZNB5 142 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 RBM23Q86U06 439 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 CNTD1Q8N815 330 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 FBXO36Q8NEA4 188 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 FATE1Q969F0 183 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 ZNF419Q96HQ0 510 aaPredicted RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 GORASP1Q9BQQ3 440 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 TMEM109Q9BVC6 243 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 SLC46A2Q9BY10 475 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 CENPHQ9H3R5 247 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 XAB2Q9HCS7 855 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 DNMT3BQ9UBC3 853 aaKnown RBP12.58□□□□□ -0.4
CBWD1-220ENST00000612045 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 TEX264Q9Y6I9 313 aa12.58□□□□□ -0.4
CBWD1-220ENST00000612045 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.57□□□□□ -0.4
CBWD1-220ENST00000612045 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.57□□□□□ -0.4
CBWD1-220ENST00000612045 J3KR12 359 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 POLR3GO15318 223 aaPredicted RBP12.57□□□□□ -0.4
CBWD1-220ENST00000612045 TSPAN3O60637 253 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 XYLBO75191 536 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 CLDN11O75508 207 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 PEX11BO96011 259 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 NFKB1P19838 968 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 GRIA1P42261 906 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 SGSHP51688 502 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 ANO4Q32M45 955 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 CCDC38Q502W7 563 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 CHST9Q7L1S5 443 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 IGDCC3Q8IVU1 814 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms