RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 ADAM28Q9UKQ2 775 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PRG3Q9Y2Y8 225 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 SLC4A7Q9Y6M7 1214 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 COL1A2P08123 1366 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 AKAP10O43572 662 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 COX4I1P13073 169 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SOX11P35716 441 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 THPOP40225 353 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 NDUFV1P49821 464 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 NEK3P51956 506 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 PLK1P53350 603 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 PTK2BQ14289 1009 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 PTAR1Q7Z6K3 402 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 CEP70Q8NHQ1 597 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SKA2Q8WVK7 121 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 PBXIP1Q96AQ6 731 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SDCCAG3Q96C92 435 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 MFSD3Q96ES6 412 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SNX27Q96L92 541 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 USP29Q9HBJ7 922 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 NT5MQ9NPB1 228 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 RCOR3Q9P2K3 495 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 LRFN2Q9ULH4 789 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 WASF2Q9Y6W5 498 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SLX4Q8IY92 1834 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SMCHD1A6NHR9 2005 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 GOLGA8CPA6NN73 597 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 DPYSL4O14531 572 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 MAGEC1O60732 1142 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 MMP3P08254 477 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 EPHA3P29320 983 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 CCR1P32246 355 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SEMA5AQ13591 1074 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 AGKQ53H12 422 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 TIGD7Q6NT04 549 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 CDHR3Q6ZTQ4 885 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 ASRGL1Q7L266 308 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 TFAP2DQ7Z6R9 452 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 ARFGAP1Q8N6T3 406 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SLC35F5Q8WV83 523 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SLC7A6OSQ96CW6 309 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 ZFP42Q96MM3 310 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 STN1Q9H668 368 aaKnown RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 ZMYND8Q9ULU4 1186 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 PLA2G4CQ9UP65 541 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 ARHGAP10A1A4S6 786 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 ZBTB24O43167 697 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 SIN3BO75182 1162 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 TOP3BO95985 862 aaKnown RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 EDNRBP24530 442 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 EEF1B2P24534 225 aaKnown RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 GRIA4P48058 902 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 TUBP50607 506 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 INCA1Q0VD86 236 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 PDE1CQ14123 709 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 FAM187BQ17R55 369 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 ARHGAP17Q68EM7 881 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 KIAA1841Q6NSI8 718 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 ISLR2Q6UXK2 745 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 GPR142Q7Z601 462 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 CAND1Q86VP6 1230 aaKnown RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 SLC41A1Q8IVJ1 513 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 PCYOX1LQ8NBM8 494 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 BLOC1S5Q8TDH9 187 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 SH3TC2Q8TF17 1288 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 KCTD4Q8WVF5 259 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 MARK4Q96L34 752 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 OMDQ99983 421 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 FAM124BQ9H5Z6 455 aaPredicted RBP8.85□□□□□ -0.99
LIG4-204ENST00000611712 COG4Q9H9E3 785 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 CHRAC1Q9NRG0 131 aa8.85□□□□□ -0.99
LIG4-204ENST00000611712 FAM95CA0A1B0GW59 222 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 F8W8V4 182 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 HDAC3O15379 428 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 TBX10O75333 385 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 SRP72O76094 671 aaKnown RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 DLDP09622 509 aaKnown RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 OR1G1P47890 313 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 SCNN1GP51170 649 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 MRPS22P82650 360 aaKnown RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 BTKQ06187 659 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 CTBP1Q13363 440 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 SNX17Q15036 470 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 MFSD14CQ5VZR4 134 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 SLC9A4Q6AI14 798 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 OVOS1Q6IE37 1185 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 IYDQ6PHW0 289 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 DHDDSQ86SQ9 333 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 SPATA6LQ8N4H0 392 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.84□□□□□ -0.99
LIG4-204ENST00000611712 AZIN2Q96A70 460 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 SIGLEC10Q96LC7 697 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 GCNAQ96QF7 691 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 WDR55Q9H6Y2 383 aaPredicted RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 DMAP1Q9NPF5 467 aaPredicted RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 IPPQ9Y573 584 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 COL24A1Q17RW2 1714 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms