RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 TMEM259Q4ZIN3 620 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 TMEM215Q68D42 235 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 KIAA1161Q6NSJ0 714 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 GIMAP7Q8NHV1 300 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 ING5Q8WYH8 240 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 ARHGEF2Q92974 986 aaKnown RBP7.38□□□□□ -1.23
CBWD1-219ENST00000611457 FAM212AQ96EL1 285 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 ELOVL2Q9NXB9 296 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 SLC12A6Q9UHW9 1150 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 ACSL6Q9UKU0 697 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 RAB21Q9UL25 225 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 PPM1HQ9ULR3 514 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 ERVW-1Q9UQF0 538 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 NEUROG3Q9Y4Z2 214 aa7.38□□□□□ -1.23
CBWD1-219ENST00000611457 VILLO15195 856 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 PABPC1P11940 636 aaKnown RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 PNLIPP16233 465 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 GRM2Q14416 872 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 LY6G5CQ5SRR4 150 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 C11orf63Q6NUN7 778 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 SH2D3CQ8N5H7 860 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 C18orf8Q96DM3 657 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 FRMD8P1Q9BZ68 369 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 CLSTN1O94985 981 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 TRUB2O95900 331 aaKnown RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 TMEM253P0C7T8 217 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 ITGB7P26010 798 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 CCDC142Q17RM4 750 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 CCDC14Q49A88 953 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 PITRM1Q5JRX3 1037 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 ASCL5Q7RTU5 278 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 CCDC170Q8IYT3 715 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 KAT5Q92993 513 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 ZNF641Q96N77 438 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 FOXQ1Q9C009 403 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 SPATA6Q9NWH7 488 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 MYO1AQ9UBC5 1043 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 SLC8A2Q9UPR5 921 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 HS3ST4Q9Y661 456 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 ANKRD62A6NC57 917 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 E5RJQ4 531 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 EBAG9O00559 213 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 CD160O95971 181 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 APOEP02649 317 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 ZNF776Q68DI1 518 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 LRRC31Q6UY01 552 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 TRMT1LQ7Z2T5 733 aaKnown RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 CYP2U1Q7Z449 544 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 SYT12Q8IV01 421 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 SPAG5Q96R06 1193 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 PCDHB18PQ96TA0 734 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 LSM14BQ9BX40 385 aaKnown RBP7.37□□□□□ -1.23
CBWD1-219ENST00000611457 MFSD1Q9H3U5 465 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 PARVAQ9NVD7 372 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 NCKIPSDQ9NZQ3 722 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 CACNA1IQ9P0X4 2223 aa7.37□□□□□ -1.23
CBWD1-219ENST00000611457 FANCGO15287 622 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SOCS5O75159 536 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 LRRN2O75325 713 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 PEX11BO96011 259 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SERPINC1P01008 464 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 CTNNA2P26232 953 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 KRT83P78385 493 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 CCDC15Q0P6D6 951 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 PIGHQ14442 188 aaPredicted RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 USP39Q53GS9 565 aaKnown RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 C6orf118Q5T5N4 469 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 PRR23CQ6ZRP0 262 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 C17orf82Q86X59 251 aaPredicted RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 TMEM25Q86YD3 366 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 CNPY4Q8N129 248 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 RTL3Q8N8U3 475 aaKnown RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SCG3Q8WXD2 468 aaKnown RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 PPP1R2P1Q96PQ5 205 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 ADAM33Q9BZ11 813 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 UCK1Q9HA47 277 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 INTS6Q9UL03 887 aaKnown RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 PPP2R2CQ9Y2T4 447 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 STON1Q9Y6Q2 735 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 PRRT4C9JH25 899 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 DCLK1O15075 740 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 CKMP06732 381 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 CR2P20023 1033 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SLC1A1P43005 524 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 MTIF2P46199 727 aaKnown RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 COPS2P61201 443 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SLC25A11Q02978 314 aaKnown RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 PLEKHG6Q3KR16 790 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 DCAF6Q58WW2 860 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 DCAF17Q5H9S7 520 aaPredicted RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 BEND6Q5SZJ8 279 aaPredicted RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 TMEM92Q6UXU6 159 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 KYAT3Q6YP21 454 aaKnown RBP7.36□□□□□ -1.23
CBWD1-219ENST00000611457 ABI3BPQ7Z7G0 1075 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SLFN11Q7Z7L1 901 aa7.36□□□□□ -1.23
CBWD1-219ENST00000611457 SLC47A2Q86VL8 602 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms