RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 FRS2Q8WU20 508 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 PTPRN2Q92932 1015 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 ARHGEF26Q96DR7 871 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 PEBP4Q96S96 227 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 FAM129BQ96TA1 746 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.1□□□□□ -0.31
CD9-212ENST00000610354 THAP2Q9H0W7 228 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 SMOC1Q9H4F8 434 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 DMXL1Q9Y485 3027 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 BCLAF3A2AJT9 711 aaKnown RBP13.09□□□□□ -0.31
CD9-212ENST00000610354 RHOBTB1O94844 696 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 MT-CO1P00395 513 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 RHOCP08134 193 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 GLDCP23378 1020 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 PSMA2P25787 234 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 DEKP35659 375 aaKnown RBP13.09□□□□□ -0.31
CD9-212ENST00000610354 PTGER3P43115 390 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 TPMTP51580 245 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 ADKP55263 362 aaKnown RBP13.09□□□□□ -0.31
CD9-212ENST00000610354 OXCT1P55809 520 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 SEMA3BQ13214 749 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 CA9Q16790 459 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 SLFN11Q7Z7L1 901 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
CD9-212ENST00000610354 SLC41A1Q8IVJ1 513 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 SIPA1Q96FS4 1042 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 CHP1Q99653 195 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 ZYG11BQ9C0D3 744 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 RSPH9Q9H1X1 276 aaPredicted RBP13.09□□□□□ -0.31
CD9-212ENST00000610354 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
CD9-212ENST00000610354 WSB2Q9NYS7 404 aaPredicted RBP13.09□□□□□ -0.31
CD9-212ENST00000610354 ANKRD62A6NC57 917 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 MFAP3LO75121 409 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 ZNF217O75362 1048 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 IGLV3-19P01714 112 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 CYP1A2P05177 515 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 MYBL1P10243 752 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 TCF4P15884 667 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 RHOQP17081 205 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 OR1E1P30953 314 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 L1CAMP32004 1257 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 ACVRL1P37023 503 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
CD9-212ENST00000610354 GALCP54803 685 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 ST8SIA6P61647 398 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
CD9-212ENST00000610354 SULT2A1Q06520 285 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
CD9-212ENST00000610354 TRIM14Q14142 442 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 ELF2Q15723 593 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 CCDC122Q5T0U0 273 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 DAB2IPQ5VWQ8 1189 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
CD9-212ENST00000610354 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 C11orf74Q86VG3 221 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 FNIP1Q8TF40 1166 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.32
CD9-212ENST00000610354 SPACA7Q96KW9 195 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 PACSIN1Q9BY11 444 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 MUC3BQ9H195 1237 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 NOL6Q9H6R4 1146 aaKnown RBP13.08□□□□□ -0.32
CD9-212ENST00000610354 ABHD10Q9NUJ1 306 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 TMEM74BQ9NUR3 256 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 TMEM248Q9NWD8 314 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 VPS51Q9UID3 782 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 VPS28Q9UK41 221 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 ACTL7AQ9Y615 435 aa13.08□□□□□ -0.32
CD9-212ENST00000610354 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.08□□□□□ -0.32
CD9-212ENST00000610354 EDDM13A0A1B0GTR0 161 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 ILVBLA1L0T0 632 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 K7ERQ8 282 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 ZBTB24O43167 697 aaPredicted RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 MAP3K13O43283 966 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 SMAD6O43541 496 aaKnown RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 ATP9BO43861 1147 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 LRP3O75074 770 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 LRCH4O75427 683 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 CD160O95971 181 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 SRCP12931 536 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 CD6P30203 668 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 MIPP30301 263 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 MPLP40238 635 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 CREB5Q02930 508 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 CSRP2Q16527 193 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 RWDD4Q6NW29 188 aaKnown RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 LPCAT2Q7L5N7 544 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 CPNE8Q86YQ8 564 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 SH2D3CQ8N5H7 860 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms