RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 FSTL4Q6MZW2 842 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 TAPT1Q6NXT6 567 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 PDZD4Q76G19 769 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 TMEM135Q86UB9 458 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 OR52K1Q8NGK4 314 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 GFM2Q969S9 779 aaKnown RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 CCDC124Q96CT7 223 aaKnown RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 KLHL8Q9P2G9 620 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 UBQLN1Q9UMX0 589 aaKnown RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 A0A096LPK6 155 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 G3V2L1 256 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 H3BRB1 525 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 CASQ2O14958 399 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-219ENST00000608720 TRIM13O60858 407 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 ATP6V1G1O75348 118 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 SERPINB6P35237 376 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 GRIK4Q16099 956 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 LPCAT4Q643R3 524 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 ALKAL1Q6UXT8 129 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 HPS6Q86YV9 775 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 TNS4Q8IZW8 715 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 PLD6Q8N2A8 252 aaKnown RBP14.96□□□□□ -0.01
CTCFL-219ENST00000608720 ZNF781Q8N8C0 355 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 NT5C3BQ969T7 300 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 EMID1Q96A84 441 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-219ENST00000608720 ZNF669Q96BR6 464 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-219ENST00000608720 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
CTCFL-219ENST00000608720 TIMMDC1Q9NPL8 285 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 GDAP2Q9NXN4 497 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 MID2Q9UJV3 735 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 VANGL2Q9ULK5 521 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 STAP1Q9ULZ2 295 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 RAD54BQ9Y620 910 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 CEP350Q5VT06 3117 aa14.96□□□□□ -0.01
CTCFL-219ENST00000608720 MAGEB16A2A368 324 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 EEF2KO00418 725 aaKnown RBP14.96□□□□□ -0.02
CTCFL-219ENST00000608720 PIRO00625 290 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 SORBS2O94875 1100 aaKnown RBP14.96□□□□□ -0.02
CTCFL-219ENST00000608720 AP2A1O95782 977 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 THRAP10827 490 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 RAG1P15918 1043 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 VCLP18206 1134 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 NUMBP49757 651 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 DPYSQ14117 519 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 LRRC36Q1X8D7 754 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 GLRA4Q5JXX5 417 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 DLK2Q6UY11 383 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 BNIPLQ7Z465 357 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 CLEC14AQ86T13 490 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 PIGZQ86VD9 579 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 GPC2Q8N158 579 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 NETO2Q8NC67 525 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 NPY6RQ99463 290 aa14.96□□□□□ -0.02
CTCFL-219ENST00000608720 EIF2AQ9BY44 585 aaKnown RBP14.96□□□□□ -0.02
CTCFL-219ENST00000608720 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-219ENST00000608720 E2F8A0AVK6 867 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 DCLK1O15075 740 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 TIMM44O43615 452 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 ZBTB14O43829 449 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 SPATA31D3P0C874 917 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 GLDCP23378 1020 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 PNPLA4P41247 253 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 HK2P52789 917 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 MSLNQ13421 630 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-219ENST00000608720 TTLL12Q14166 644 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-219ENST00000608720 TRIP10Q15642 601 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 SMAD1Q15797 465 aaKnown RBP14.95□□□□□ -0.02
CTCFL-219ENST00000608720 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 SLC9B1Q4ZJI4 515 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 MARCH8Q5T0T0 291 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 MAMDC4Q6UXC1 1216 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 NAPRTQ6XQN6 538 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 SPATA31D4Q6ZUB0 917 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 CATSPER4Q7RTX7 472 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 TDRD5Q8NAT2 981 aaKnown RBP14.95□□□□□ -0.02
CTCFL-219ENST00000608720 SHCBP1Q8NEM2 672 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 APPL2Q8NEU8 664 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 URGCPQ8TCY9 931 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 TNIP3Q96KP6 325 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 ZNF560Q96MR9 790 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 BTBD9Q96Q07 612 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 ILKAPQ9H0C8 392 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-219ENST00000608720 NMRAL1Q9HBL8 299 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 VTA1Q9NP79 307 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 CASS4Q9NQ75 786 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 EVPLQ92817 2033 aa14.95□□□□□ -0.02
CTCFL-219ENST00000608720 ZCWPW2A0A1B0GU75 182 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 ERI2A8K979 691 aaKnown RBP14.94□□□□□ -0.02
CTCFL-219ENST00000608720 E9PBE3 544 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 M0QYT0 321 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 HNRNPRO43390 633 aaKnown RBP14.94□□□□□ -0.02
CTCFL-219ENST00000608720 KLHL41O60662 606 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 APOA4P06727 396 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 PTPN3P26045 913 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 PEX2P28328 305 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 GMPRP36959 345 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 HADHAP40939 763 aa14.94□□□□□ -0.02
CTCFL-219ENST00000608720 CSE1LP55060 971 aaKnown RBP14.94□□□□□ -0.02
CTCFL-219ENST00000608720 AQP4P55087 323 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms