RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 CREB3O43889 395 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 LRCH4O75427 683 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 EPN2O95208 641 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 RETP07949 1114 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 SRPRAP08240 638 aaKnown RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 MIPP30301 263 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 ACVRL1P37023 503 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 DHPSP49366 369 aaPredicted RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 TPMTP51580 245 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 ZNF75DP51815 510 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 GALCP54803 685 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 ST8SIA6P61647 398 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 RPS14P62263 151 aaKnown RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 NRG1Q02297 640 aaPredicted RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 SLC12A1Q13621 1099 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 HNRNPA1L2Q32P51 320 aaKnown RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 EFHC2Q5JST6 749 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 C9orf64Q5T6V5 341 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 SETD3Q86TU7 594 aaPredicted RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 FAM124AQ86V42 546 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 PRCCQ92733 491 aaPredicted RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 TBC1D31Q96DN5 1066 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 TRIM11Q96F44 468 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 SIPA1Q96FS4 1042 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 SNRNP25Q9BV90 132 aaKnown RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 NUP85Q9BW27 656 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 PPARGC1AQ9UBK2 798 aaKnown RBP13.99□□□□□ -0.17
TMEM259-212ENST00000607316 VPS51Q9UID3 782 aa13.99□□□□□ -0.17
TMEM259-212ENST00000607316 K7ERQ8 282 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 CYP1A2P05177 515 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 IL1R2P27930 398 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 METAP1P53582 386 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 RPL6Q02878 288 aaKnown RBP13.98□□□□□ -0.17
TMEM259-212ENST00000607316 CREB5Q02930 508 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 SEMA3BQ13214 749 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
TMEM259-212ENST00000607316 ELF2Q15723 593 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 SLC18A3Q16572 532 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 C6orf118Q5T5N4 469 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 TXNRD3NBQ6F5E7 133 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 TCEAL6Q6IPX3 200 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 STK40Q8N2I9 435 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 TC2NQ8N9U0 490 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 FNIP1Q8TF40 1166 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 FRS2Q8WU20 508 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 PTPRN2Q92932 1015 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 TCEAL3Q969E4 200 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 KCTD15Q96SI1 283 aaPredicted RBP13.98□□□□□ -0.17
TMEM259-212ENST00000607316 SPON2Q9BUD6 331 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 MRPL47Q9HD33 250 aaKnown RBP13.98□□□□□ -0.17
TMEM259-212ENST00000607316 TMEM51Q9NW97 253 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 SERGEFQ9UGK8 458 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 SLC25A13Q9UJS0 675 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 USP18Q9UMW8 372 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
TMEM259-212ENST00000607316 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.98□□□□□ -0.17
TMEM259-212ENST00000607316 TNRC6BQ9UPQ9 1833 aaKnown RBP13.98□□□□□ -0.17
TMEM259-212ENST00000607316 DCHS1Q96JQ0 3298 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 AKR1B15C9JRZ8 316 aaPredicted RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 RNF103O00237 685 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 CBX4O00257 560 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 ZBTB24O43167 697 aaPredicted RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 MAP3K13O43283 966 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 SMAD6O43541 496 aaKnown RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 RHOBTB1O94844 696 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 TPM1P09493 284 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 SRCP12931 536 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 RHOQP17081 205 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 EPHB2P29323 1055 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 L1CAMP32004 1257 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 MPLP40238 635 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 PSMD8P48556 350 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 OXCT1P55809 520 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 ARF5P84085 180 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 GNA12Q03113 381 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 SULT2A1Q06520 285 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 SF3A2Q15428 464 aaKnown RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 DLG2Q15700 870 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 SMTNL2Q2TAL5 461 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 ACCSLQ4AC99 568 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 KCNT1Q5JUK3 1230 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 ACBD5Q5T8D3 534 aaPredicted RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 LEKR1Q6ZMV7 388 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 Q6ZVU0 165 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 MMAAQ8IVH4 418 aaKnown RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 SLC41A1Q8IVJ1 513 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 SH2D3CQ8N5H7 860 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 DCAF4L2Q8NA75 395 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 KDM1BQ8NB78 822 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 NETO2Q8NC67 525 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 TOE1Q96GM8 510 aaKnown RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 RSPH9Q9H1X1 276 aaPredicted RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 DEF6Q9H4E7 631 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 DHX35Q9H5Z1 703 aaKnown RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 NOL6Q9H6R4 1146 aaKnown RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 NHEJ1Q9H9Q4 299 aaPredicted RBP13.97□□□□□ -0.17
TMEM259-212ENST00000607316 ATP13A1Q9HD20 1204 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 ITM2CQ9NQX7 267 aa13.97□□□□□ -0.17
TMEM259-212ENST00000607316 RXFP3Q9NSD7 469 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms