RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 RABGAP1LQ5R372 815 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 ADGRF1Q5T601 910 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 PDCD7Q8N8D1 485 aaKnown RBP22.08■■□□□ 1.12
USP6NL-204ENST00000606752 ATP11CQ8NB49 1132 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 DDX50Q9BQ39 737 aaKnown RBP22.08■■□□□ 1.12
USP6NL-204ENST00000606752 WDR83Q9BRX9 315 aaKnown RBP22.08■■□□□ 1.12
USP6NL-204ENST00000606752 RSPH14Q9UHP6 348 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 TEX264Q9Y6I9 313 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 F5H423 210 aaPredicted RBP22.07■■□□□ 1.12
USP6NL-204ENST00000606752 CCL16O15467 120 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 TSHRP16473 764 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 OR1E1P30953 314 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 ELK3P41970 407 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 MAGEA3P43357 314 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 YBEYP58557 167 aaPredicted RBP22.07■■□□□ 1.12
USP6NL-204ENST00000606752 DNAJC21Q5F1R6 531 aaKnown RBP22.07■■□□□ 1.12
USP6NL-204ENST00000606752 PDE12Q6L8Q7 609 aaKnown RBP22.07■■□□□ 1.12
USP6NL-204ENST00000606752 ZNF534Q76KX8 674 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 CIR1Q86X95 450 aaPredicted RBP22.07■■□□□ 1.12
USP6NL-204ENST00000606752 PALM2Q8IXS6 379 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 FATE1Q969F0 183 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 LRRC39Q96DD0 335 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 HMCESQ96FZ2 354 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 PGM2Q96G03 612 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 IL12RB2Q99665 862 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 CORO1BQ9BR76 489 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 ATXN3LQ9H3M9 355 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 VPS37BQ9H9H4 285 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 ASAH2Q9NR71 780 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 BCCIPQ9P287 314 aaKnown RBP eCLIP22.07■■□□□ 1.12
USP6NL-204ENST00000606752 PCDHA11Q9Y5I1 949 aa22.07■■□□□ 1.12
USP6NL-204ENST00000606752 ANAPC1Q9H1A4 1944 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 RAMP2O60895 175 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 LATS1O95835 1130 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 MLNP12872 115 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 GPX6P59796 221 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 CYP4F8P98187 520 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 POLD3Q15054 466 aaPredicted RBP22.06■■□□□ 1.12
USP6NL-204ENST00000606752 ANO4Q32M45 955 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 PARP15Q460N3 678 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 C3orf62Q6ZUJ4 267 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 CFAP52Q8N1V2 620 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 CNTD1Q8N815 330 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 EPS8L3Q8TE67 593 aaKnown RBP22.06■■□□□ 1.12
USP6NL-204ENST00000606752 WBP2Q969T9 261 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 GCNAQ96QF7 691 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 STOML2Q9UJZ1 356 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 ZFP37Q9Y6Q3 630 aaPredicted RBP22.06■■□□□ 1.12
USP6NL-204ENST00000606752 DOCK4Q8N1I0 1966 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 MYO18AQ92614 2054 aaKnown RBP22.06■■□□□ 1.12
USP6NL-204ENST00000606752 IVLP07476 585 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 PHBP35232 272 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 CDH4P55283 916 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 ERVK-21P61565 698 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 IGDCC3Q8IVU1 814 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 MAB21L3Q8N8X9 362 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 FAM76AQ8TAV0 307 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 MAML1Q92585 1016 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 MAN1C1Q9NR34 630 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 CHMP2BQ9UQN3 213 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 CPQQ9Y646 472 aa22.06■■□□□ 1.12
USP6NL-204ENST00000606752 SMIM23A6NLE4 172 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 ERI2A8K979 691 aaKnown RBP22.05■■□□□ 1.12
USP6NL-204ENST00000606752 CLASP2O75122 1294 aaKnown RBP22.05■■□□□ 1.12
USP6NL-204ENST00000606752 MYL4P12829 197 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 PFKLP17858 780 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 NFKB1P19838 968 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 GRIA1P42261 906 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 GYS2P54840 703 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 SLC7A9P82251 487 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 GPM6BQ13491 265 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 LONRF1Q17RB8 773 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 LRRC8BQ6P9F7 803 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 AGGF1Q8N302 714 aaeCLIP22.05■■□□□ 1.12
USP6NL-204ENST00000606752 SH2D3CQ8N5H7 860 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 ADAMTS19Q8TE59 1207 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 USP33Q8TEY7 942 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 GORASP1Q9BQQ3 440 aa22.05■■□□□ 1.12
USP6NL-204ENST00000606752 A0A1W2PRU2 124 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 H3BNC9 293 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 RGS16O15492 202 aaPredicted RBP22.04■■□□□ 1.12
USP6NL-204ENST00000606752 CACNG3O60359 315 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 CLDN11O75508 207 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 AP2A1O95782 977 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 SSTR1P30872 391 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 HOXA9P31269 272 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 SLCO1A2P46721 670 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 HNRNPDQ14103 355 aaKnown RBP22.04■■□□□ 1.12
USP6NL-204ENST00000606752 PRPSAP1Q14558 356 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 CAPN12Q6ZSI9 719 aa22.04■■□□□ 1.12
USP6NL-204ENST00000606752 PRICKLE1Q96MT3 831 aaPredicted RBP22.04■■□□□ 1.12
USP6NL-204ENST00000606752 RBM22Q9NW64 420 aaKnown RBP eCLIP22.04■■□□□ 1.12
USP6NL-204ENST00000606752 TRAV19A0A0A6YYK7 116 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 RFPL2O75678 378 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 SUN1O94901 812 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 FGF19O95750 216 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 PEX11BO96011 259 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 RPS24P62847 133 aaKnown RBP22.03■■□□□ 1.12
USP6NL-204ENST00000606752 ZXDBP98169 803 aa22.03■■□□□ 1.12
USP6NL-204ENST00000606752 SERINC3Q13530 473 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms