RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 C14orf80Q86SX3 495 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF683Q8IZ20 524 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 RGL4Q8IZJ4 473 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 FRMD1Q8N878 549 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF366Q8N895 744 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 DCAF4L2Q8NA75 395 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 GANCQ8TET4 914 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 MYO19Q96H55 970 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 BTBD1Q9H0C5 482 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 SGK2Q9HBY8 427 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 CAPN11Q9UMQ6 739 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 CKAP5Q14008 2032 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 THADAQ6YHU6 1953 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TMCO5BA8MYB1 307 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TTC34A8MYJ7 566 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 EIF3CLB5ME19 914 aaKnown RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 ALOX15BO15296 676 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 ATP9BO43861 1147 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SIN3BO75182 1162 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 RNF8O76064 485 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 CNTN5O94779 1100 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 FTLP02792 175 aaPredicted RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 CFIP05156 583 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SYPP08247 313 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 PLEKP08567 350 aaPredicted RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SERPINF2P08697 491 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 RHOQP17081 205 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 C5AR1P21730 350 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 ITPKAP23677 461 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 RRM1P23921 792 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 HTR7P34969 479 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 GGCXP38435 758 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 CTSOP43234 321 aaPredicted RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 HDAC4P56524 1084 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 GEMIN4P57678 1058 aaKnown RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 GFPT1Q06210 699 aaPredicted RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 CCDC15Q0P6D6 951 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 MAMLD1Q13495 774 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 CST6Q15828 149 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 ALFQ53S48 1182 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TRIM61Q5EBN2 209 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 DAB2IPQ5VWQ8 1189 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 PLEKHA7Q6IQ23 1121 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 RWDD4Q6NW29 188 aaKnown RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SCYL2Q6P3W7 929 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SLC23A3Q6PIS1 610 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TMC6Q7Z403 805 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TFAP2DQ7Z6R9 452 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 FNIP1Q8TF40 1166 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 OR8D1Q8WZ84 308 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 TBC1D31Q96DN5 1066 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 ALG14Q96F25 216 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 RPL10LQ96L21 214 aaKnown RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 EIF3CQ99613 913 aaKnown RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 EPAS1Q99814 870 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 OMDQ99983 421 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 EDEM2Q9BV94 578 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 GPR174Q9BXC1 333 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 PABPC3Q9H361 631 aaKnown RBP11.85□□□□□ -0.51
CCDC12-209ENST00000604164 ANLNQ9NQW6 1124 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 MPP6Q9NZW5 540 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SLCO3A1Q9UIG8 710 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 FZD4Q9ULV1 537 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 HPCAL4Q9UM19 191 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 SLC6A14Q9UN76 642 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 HS3ST2Q9Y278 367 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 OR51B4Q9Y5P0 310 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 RALGAPA1Q6GYQ0 2036 aa11.85□□□□□ -0.51
CCDC12-209ENST00000604164 METTL12A8MUP2 240 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 C1QTNF3-AMACRE9PGA6 284 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 I6L893 689 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-209ENST00000604164 CCP110O43303 1012 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 SEMA4FO95754 770 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 PSMA2P25787 234 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 L1CAMP32004 1257 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-209ENST00000604164 IRAK1P51617 712 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 ATXN3P54252 364 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-209ENST00000604164 ACAP1Q15027 740 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 SH3PXD2AQ5TCZ1 1133 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 STPG1Q5TH74 334 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 FAM124AQ86V42 546 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 CACUL1Q86Y37 369 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 SH2D3CQ8N5H7 860 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 DEFB119Q8N690 84 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 ATP11CQ8NB49 1132 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 DNASE2BQ8WZ79 361 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 ZDHHC5Q9C0B5 715 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 CATSPERBQ9H7T0 1116 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 TMEM9BQ9NQ34 198 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 ZNHIT6Q9NWK9 470 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms