RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SLC9A8Q9Y2E8 581 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 FAM92AA1XBS5 289 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 GRIA3P42263 894 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PIK3CGP48736 1102 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 CDC42P60953 191 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 SQLEQ14534 574 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 VPS72Q15906 364 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 ATG14Q6ZNE5 492 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PNPLA3Q9NST1 481 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PLA2G4CQ9UP65 541 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 ENTPD4Q9Y227 616 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PPLO60437 1756 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 BTN3A1O00481 513 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 GUCY1B2O75343 617 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ZBTB7AO95365 584 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ENO2P09104 434 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TYMPP19971 482 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TOP3AQ13472 1001 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 QPRTQ15274 297 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF484Q5JVG2 852 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CES3Q6UWW8 571 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 OR52L1Q8NGH7 329 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ASB2Q96Q27 587 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF70Q9UC06 446 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 LCA5LO95447 670 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 NUDT14O95848 222 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 UMPSP11172 480 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CDH3P22223 829 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CDC25CP30307 473 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SSTR1P30872 391 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 GNA13Q14344 377 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 MARC1Q5VT66 337 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ISLR2Q6UXK2 745 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SAPCD2Q86UD0 394 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 WDR60Q8WVS4 1066 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ZKSCAN4Q969J2 545 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TMEM169Q96HH4 297 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 RSL24D1Q9UHA3 163 aaKnown RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 PCDHA3Q9Y5H8 950 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TPP1O14773 563 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SNAP91O60641 907 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 PECAM1P16284 738 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TFAP2DQ7Z6R9 452 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 APBA2Q99767 749 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CATSPERZQ9NTU4 200 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF112Q9UJU3 913 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ING4Q9UNL4 249 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TTC3P53804 2025 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 A0A0G2JLW4 131 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ERVK-9P63128 1117 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 PERM1Q5SV97 790 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TAF8Q7Z7C8 310 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 PROSER1Q86XN7 944 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 FAM210AQ96ND0 272 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TAF6LQ9Y6J9 622 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 NCOA3Q9Y6Q9 1424 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SLC12A8A0AV02 714 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 MOXD1Q6UVY6 613 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 MILR1Q7Z6M3 343 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 STX12Q86Y82 276 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 FUKQ8N0W3 1084 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 LPCAT1Q8NF37 534 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 BPIFB6Q8NFQ5 453 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 HLA-DQA2P01906 255 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 RPN2P04844 631 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 WEE1P30291 646 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SREBF1P36956 1147 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TKTL1P51854 596 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 EPHB3P54753 998 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 NR1H2P55055 460 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TCEAL5Q5H9L2 206 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 PRR5LQ6MZQ0 368 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ZCCHC23Q6ZST2 131 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 LRRN4CLQ8ND94 238 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 S100ZQ8WXG8 99 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SLC5A5Q92911 643 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SLC9A7Q96T83 725 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 PDCD10Q9BUL8 212 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 GDF3Q9NR23 364 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 SMIM22K7EJ46 135 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 COX7A2P14406 83 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TPH1P17752 444 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ADRA1DP25100 572 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 GCLCP48506 637 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 STARP49675 285 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 FAAP100Q0VG06 881 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ANGEL2Q5VTE6 544 aaKnown RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 RNF44Q7L0R7 432 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 MCOLN3Q8TDD5 553 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 TRDMT1O14717 391 aaKnown RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CBFA2T3O75081 653 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CYP1A1P04798 512 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-217ENST00000602723 FGRP09769 529 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF286BP0CG31 522 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 ADSSP30520 456 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CASP5P51878 434 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 MTTPP55157 894 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 CTXN3Q4LDR2 81 aa9.75□□□□□ -0.85
CSMD1-217ENST00000602723 NANOGNBQ7Z5D8 188 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms